The 2.0 version of rSNPBase

Variant report

Variant rs62259941
Chromosome Location chr3:49415301-49415302
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:49396400-49418600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr3:49396800-49438800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr3:49397200-49423800 Weak transcription Fetal Heart heart
4 chr3:49397400-49416400 Strong transcription Fetal Intestine Small intestine
5 chr3:49397800-49415800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr3:49399000-49448000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr3:49406000-49416000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr3:49406000-49416000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr3:49406000-49445200 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr3:49410600-49421800 Weak transcription K562 blood
11 chr3:49411000-49416000 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr3:49411000-49434600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr3:49411200-49418800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr3:49411200-49423200 Weak transcription Primary hematopoietic stem cells blood
15 chr3:49411200-49423800 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr3:49411800-49417200 Weak transcription Colon Smooth Muscle Colon
17 chr3:49412200-49415800 Weak transcription Stomach Mucosa stomach
18 chr3:49412400-49415800 Weak transcription Right Ventricle heart
19 chr3:49413000-49415800 Weak transcription Stomach Smooth Muscle stomach
20 chr3:49413000-49417200 Weak transcription Small Intestine intestine
21 chr3:49413000-49418800 Weak transcription Primary neutrophils fromperipheralblood blood
22 chr3:49413000-49421600 Weak transcription Rectal Smooth Muscle rectum
23 chr3:49413000-49422000 Weak transcription Pancreas Pancrea
24 chr3:49413000-49423200 Weak transcription Brain Anterior Caudate brain
25 chr3:49413000-49423800 Weak transcription HUVEC blood vessel
26 chr3:49413200-49415400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr3:49413200-49415800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr3:49413200-49415800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr3:49413200-49415800 Weak transcription Liver Liver
30 chr3:49413200-49415800 Weak transcription Brain Substantia Nigra brain
31 chr3:49413200-49415800 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr3:49413200-49415800 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr3:49413200-49416000 Weak transcription H1 Cell Line embryonic stem cell
34 chr3:49413200-49416000 Weak transcription iPS-18 Cell Line embryonic stem cell
35 chr3:49413200-49416000 Weak transcription Brain Inferior Temporal Lobe brain
36 chr3:49413200-49416200 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr3:49413200-49416200 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr3:49413200-49416200 Weak transcription NHLF lung
39 chr3:49413200-49417000 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr3:49413200-49417800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr3:49413200-49419800 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr3:49413200-49423200 Weak transcription Primary T cells from cord blood blood
43 chr3:49413200-49423200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr3:49413200-49423200 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr3:49413200-49425400 Weak transcription Brain Hippocampus Middle brain
46 chr3:49413200-49425600 Weak transcription Hela-S3 cervix
47 chr3:49413200-49431800 Weak transcription Duodenum Mucosa Duodenum
48 chr3:49413200-49432000 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr3:49413200-49432000 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr3:49413200-49432000 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015