Variant report

Variant rs62289338
Chromosome Location chr4:7878859-7878860
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:7857800-7896400 Weak transcription Spleen Spleen
2 chr4:7866000-7882400 Weak transcription iPS-18 Cell Line embryonic stem cell
3 chr4:7866000-7885600 Weak transcription Esophagus oesophagus
4 chr4:7869200-7880800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr4:7870400-7879200 Weak transcription Duodenum Mucosa Duodenum
6 chr4:7870400-7882400 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr4:7873400-7879000 Weak transcription H1 Cell Line embryonic stem cell
8 chr4:7873400-7880000 Weak transcription Lung lung
9 chr4:7873400-7883000 Weak transcription Right Ventricle heart
10 chr4:7873600-7894000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr4:7874400-7880200 Weak transcription Gastric stomach
12 chr4:7874400-7880200 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr4:7874400-7880800 Weak transcription Pancreas Pancrea
14 chr4:7874600-7879800 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr4:7874600-7880000 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr4:7874600-7881000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr4:7874600-7887600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr4:7874600-7892800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr4:7874600-7894000 Weak transcription Placenta Amnion Placenta Amnion
20 chr4:7875800-7881000 Weak transcription Stomach Mucosa stomach
21 chr4:7876000-7879200 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr4:7876000-7880400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr4:7876000-7891800 Weak transcription Hela-S3 cervix
24 chr4:7876800-7880200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
25 chr4:7876800-7881800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr4:7876800-7885400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr4:7877000-7879600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr4:7877000-7883200 Enhancers Colon Smooth Muscle Colon
29 chr4:7877200-7879800 Enhancers Primary T cells fromperipheralblood blood
30 chr4:7877400-7883200 Enhancers Fetal Heart heart
31 chr4:7877400-7885000 Enhancers NH-A brain
32 chr4:7877600-7879400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
33 chr4:7877600-7879800 Enhancers Primary T helper naive cells fromperipheralblood blood
34 chr4:7877600-7879800 Enhancers NHDF-Ad bronchial
35 chr4:7877800-7879200 Enhancers Primary T killer naive cells fromperipheralblood blood
36 chr4:7877800-7879200 Flanking Active TSS Stomach Smooth Muscle stomach
37 chr4:7877800-7879200 Enhancers NHLF lung
38 chr4:7877800-7879400 Enhancers HMEC breast
39 chr4:7877800-7879600 Enhancers Primary T killer memory cells from peripheral blood blood
40 chr4:7877800-7879600 Enhancers Osteobl bone
41 chr4:7877800-7881400 Enhancers Breast Myoepithelial Primary Cells Breast
42 chr4:7877800-7883200 Enhancers Cortex derived primary cultured neurospheres brain
43 chr4:7877800-7883200 Enhancers Fetal Stomach stomach
44 chr4:7877800-7883200 Enhancers Ovary ovary
45 chr4:7877800-7883200 Enhancers HSMM muscle
46 chr4:7877800-7883400 Enhancers Fetal Muscle Leg muscle
47 chr4:7878000-7879000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr4:7878000-7879000 Enhancers Primary mononuclear cells fromperipheralblood Blood
49 chr4:7878000-7879000 Enhancers Adipose Nuclei Adipose
50 chr4:7878000-7879000 Enhancers Fetal Adrenal Gland Adrenal Gland

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