Variant report

Variant rs6829680
Chromosome Location chr4:7912333-7912334
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:7894200-7912400 Weak transcription Fetal Intestine Large intestine
2 chr4:7899800-7930600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr4:7900200-7912400 Weak transcription NHEK skin
4 chr4:7900800-7914400 Enhancers ES-I3 Cell Line embryonic stem cell
5 chr4:7901600-7914400 Enhancers Fetal Muscle Leg muscle
6 chr4:7903600-7915000 Enhancers Fetal Stomach stomach
7 chr4:7905600-7912400 Enhancers HUES6 Cell Line embryonic stem cell
8 chr4:7906000-7914200 Enhancers Cortex derived primary cultured neurospheres brain
9 chr4:7906200-7914400 Enhancers HUVEC blood vessel
10 chr4:7907000-7912400 Weak transcription Left Ventricle heart
11 chr4:7907800-7914200 Enhancers Brain Germinal Matrix brain
12 chr4:7907800-7935800 Weak transcription Right Ventricle heart
13 chr4:7908000-7912600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr4:7908000-7912800 Enhancers HUES64 Cell Line embryonic stem cell
15 chr4:7908200-7912600 Enhancers HepG2 liver
16 chr4:7908400-7912400 Weak transcription Fetal Intestine Small intestine
17 chr4:7909200-7912800 Weak transcription Fetal Kidney kidney
18 chr4:7909200-7925400 Weak transcription Hela-S3 cervix
19 chr4:7909400-7912400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
20 chr4:7909800-7912400 Enhancers HSMMtube muscle
21 chr4:7909800-7912600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
22 chr4:7910000-7912400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
23 chr4:7910200-7912600 Enhancers Primary T helper cells PMA-I stimulated --
24 chr4:7910400-7912400 Enhancers Rectal Smooth Muscle rectum
25 chr4:7910400-7912600 Enhancers Primary T helper cells fromperipheralblood blood
26 chr4:7910400-7913400 Enhancers H9 Cell Line embryonic stem cell
27 chr4:7910600-7912400 Enhancers iPS-20b Cell Line embryonic stem cell
28 chr4:7910600-7912800 Enhancers iPS-15b Cell Line embryonic stem cell
29 chr4:7910800-7912400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr4:7910800-7912400 Enhancers iPS-18 Cell Line embryonic stem cell
31 chr4:7910800-7913400 Enhancers Stomach Mucosa stomach
32 chr4:7910800-7913600 Flanking Active TSS A549 lung
33 chr4:7910800-7913800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr4:7910800-7913800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr4:7910800-7914200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr4:7911000-7912400 Enhancers Colonic Mucosa Colon
37 chr4:7911000-7912600 Enhancers HUES48 Cell Line embryonic stem cell
38 chr4:7911000-7912800 Enhancers Breast Myoepithelial Primary Cells Breast
39 chr4:7911000-7913000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr4:7911000-7914000 Enhancers Skeletal Muscle Male skeletal muscle
41 chr4:7911000-7914200 Enhancers HMEC breast
42 chr4:7911200-7912400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr4:7911200-7912400 Enhancers Adipose Nuclei Adipose
44 chr4:7911200-7912800 Enhancers Gastric stomach
45 chr4:7911200-7913000 Enhancers Rectal Mucosa Donor 31 rectum
46 chr4:7911200-7913000 Enhancers Sigmoid Colon Sigmoid Colon
47 chr4:7911200-7913200 Enhancers Brain Inferior Temporal Lobe brain
48 chr4:7911200-7913600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr4:7911200-7913600 Flanking Active TSS Muscle Satellite Cultured Cells --
50 chr4:7911200-7913800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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