Variant report

Variant	rs62325462
Chromosome Location	chr4:99593653-99593654
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10034690	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10470954	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1528008	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6819703	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:99585200-99593800	Weak transcription	Stomach Mucosa	stomach
2	chr4:99585200-99594200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr4:99586600-99593800	Weak transcription	Thymus	Thymus
4	chr4:99587200-99593800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr4:99587200-99598800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr4:99587400-99594000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr4:99592600-99594400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr4:99593400-99593800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr4:99593400-99594400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
10	chr4:99593600-99594600	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr4:99593600-99594800	Enhancers	Primary hematopoietic stem cells	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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