Variant report

Variant	rs62372624
Chromosome Location	chr5:68359494-68359495
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10471766	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11742568	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12651824	0.87[EUR][1000 genomes]
rs2076823	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4976178	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs60544415	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6450015	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6450016	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv968920	chr5:68350235-68371417	Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:68359400-68360200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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