Variant report

Variant	rs62400448
Chromosome Location	chr6:24335947-24335948
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs35830445	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62400443	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62400444	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62400452	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6921810	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7765678	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9467116	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:24327400-24339200	Weak transcription	Pancreas	Pancrea
2	chr6:24330200-24338400	Weak transcription	Fetal Intestine Large	intestine
3	chr6:24332600-24338600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr6:24334400-24339600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr6:24334800-24336400	Strong transcription	A549	lung
6	chr6:24334800-24338200	Weak transcription	Fetal Kidney	kidney
7	chr6:24335200-24337200	Strong transcription	HepG2	liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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