Variant report

Variant	rs62443703
Chromosome Location	chr7:14333033-14333034
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11974509	0.94[ASN][1000 genomes]
rs17168038	1.00[EUR][1000 genomes]
rs17168042	0.98[AFR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4483055	1.00[ASN][1000 genomes]
rs56752869	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62443666	1.00[EUR][1000 genomes]
rs62443668	0.95[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs62443673	1.00[EUR][1000 genomes]
rs62443937	0.86[ASN][1000 genomes]
rs6944473	0.86[ASN][1000 genomes]
rs6962605	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv606280	chr7:14327966-14352001	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14332600-14333600	Weak transcription	Sigmoid Colon	Sigmoid Colon

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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