Variant report
| Variant | rs62448773 |
|---|---|
| Chromosome Location | chr7:22255739-22255740 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr7:22233400-22259200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 2 | chr7:22233600-22257000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 3 | chr7:22235600-22260600 | Weak transcription | GM12878-XiMat | blood |
| 4 | chr7:22238000-22264600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 5 | chr7:22241000-22267800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 6 | chr7:22243400-22255800 | Weak transcription | Liver | Liver |
| 7 | chr7:22243400-22307200 | Weak transcription | Thymus | Thymus |
| 8 | chr7:22243600-22256600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 9 | chr7:22243600-22258400 | Weak transcription | Fetal Intestine Small | intestine |
| 10 | chr7:22244200-22258000 | Weak transcription | Fetal Intestine Large | intestine |
| 11 | chr7:22244200-22258400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 12 | chr7:22244200-22258600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 13 | chr7:22244600-22258000 | Weak transcription | Primary B cells from cord blood | blood |
| 14 | chr7:22244600-22259800 | Weak transcription | Colon Smooth Muscle | Colon |
| 15 | chr7:22244800-22256800 | Weak transcription | Fetal Muscle Leg | muscle |
| 16 | chr7:22247600-22256400 | Enhancers | Brain Cingulate Gyrus | brain |
| 17 | chr7:22247800-22256400 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 18 | chr7:22247800-22258000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 19 | chr7:22248800-22255800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 20 | chr7:22249400-22255800 | Weak transcription | Psoas Muscle | Psoas |
| 21 | chr7:22249600-22256000 | Enhancers | Brain Substantia Nigra | brain |
| 22 | chr7:22249800-22256000 | Strong transcription | HepG2 | liver |
| 23 | chr7:22250000-22256800 | Enhancers | Brain Angular Gyrus | brain |
| 24 | chr7:22250400-22257800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 25 | chr7:22250400-22258800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 26 | chr7:22250800-22259400 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 27 | chr7:22250800-22261800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 28 | chr7:22251000-22258800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 29 | chr7:22251400-22258600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 30 | chr7:22251600-22256000 | Enhancers | Brain Hippocampus Middle | brain |
| 31 | chr7:22252000-22255800 | Weak transcription | Pancreas | Pancrea |
| 32 | chr7:22252200-22255800 | Weak transcription | Lung | lung |
| 33 | chr7:22252400-22264000 | Weak transcription | Spleen | Spleen |
| 34 | chr7:22253000-22256200 | Genic enhancers | Dnd41 | blood |
| 35 | chr7:22253000-22256800 | Weak transcription | Fetal Kidney | kidney |
| 36 | chr7:22253800-22260200 | Active TSS | Adipose Nuclei | Adipose |
| 37 | chr7:22254000-22256000 | Enhancers | Brain Anterior Caudate | brain |
| 38 | chr7:22254000-22257000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 39 | chr7:22254000-22258600 | Weak transcription | Esophagus | oesophagus |
| 40 | chr7:22254000-22259000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 41 | chr7:22254000-22274000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 42 | chr7:22254200-22256200 | Enhancers | HUVEC | blood vessel |
| 43 | chr7:22254400-22258400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 44 | chr7:22254600-22259200 | Strong transcription | Fetal Thymus | thymus |
| 45 | chr7:22254600-22260800 | Active TSS | Right Atrium | heart |
| 46 | chr7:22254600-22274000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 47 | chr7:22255000-22256000 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
| 48 | chr7:22255400-22255800 | Weak transcription | Aorta | Aorta |
| 49 | chr7:22255400-22255800 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 50 | chr7:22255400-22260000 | Active TSS | Right Ventricle | heart |
