Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:27701957..27704245-chr7:27706162..27711056,8	K562	blood:
2	chr7:27702921..27706495-chr7:27708435..27711221,3	K562	blood:

Variant related genes	Relation type
ENSG00000106049	Chromatin interaction

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10486549	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11550134	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11767324	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs12666082	0.86[EUR][1000 genomes]
rs12667470	0.82[EUR][1000 genomes]
rs1524525	0.82[AMR][1000 genomes]
rs17150563	0.88[EUR][1000 genomes]
rs17155498	0.83[EUR][1000 genomes]
rs17155501	0.83[EUR][1000 genomes]
rs17155505	0.83[EUR][1000 genomes]
rs17155525	0.82[EUR][1000 genomes]
rs17155537	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2192559	0.83[EUR][1000 genomes]
rs2391450	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs58231871	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs58857361	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs59686784	0.82[EUR][1000 genomes]
rs61407744	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs62454806	0.80[EUR][1000 genomes]
rs62454870	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs62454871	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs62454872	0.81[AMR][1000 genomes]
rs62454876	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs62454908	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62456947	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs62456951	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs72596966	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs759268	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949025	chr7:27578167-28075172	Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs62454914	TAX1BP1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:27704200-27711000	Weak transcription	Duodenum Mucosa	Duodenum
2	chr7:27705000-27710000	Weak transcription	HepG2	liver
3	chr7:27705200-27709600	Weak transcription	K562	blood

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