Variant report

Variant	rs62512089
Chromosome Location	chr8:60912553-60912554
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs10081579	0.90[ASN][1000 genomes]
rs10097767	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10098915	0.90[ASN][1000 genomes]
rs10111058	0.81[EUR][1000 genomes]
rs10957118	1.00[ASN][1000 genomes]
rs17271634	0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs1995941	0.90[ASN][1000 genomes]
rs28445557	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28626870	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28668089	0.90[ASN][1000 genomes]
rs28673143	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28690268	0.90[ASN][1000 genomes]
rs57344747	0.90[ASN][1000 genomes]
rs6997337	0.90[ASN][1000 genomes]
rs6998079	0.90[ASN][1000 genomes]
rs72659716	0.90[ASN][1000 genomes]
rs72659731	0.90[ASN][1000 genomes]
rs72659733	0.90[ASN][1000 genomes]
rs72659760	0.90[ASN][1000 genomes]
rs72659762	0.90[ASN][1000 genomes]
rs72659763	0.90[ASN][1000 genomes]
rs72659765	0.90[ASN][1000 genomes]
rs72659799	0.90[ASN][1000 genomes]
rs72659801	0.90[ASN][1000 genomes]
rs72659802	0.90[ASN][1000 genomes]
rs72661403	0.90[ASN][1000 genomes]
rs72661404	0.90[ASN][1000 genomes]
rs72661406	0.90[ASN][1000 genomes]
rs72661410	0.90[ASN][1000 genomes]
rs72661416	0.90[ASN][1000 genomes]
rs72661421	0.90[ASN][1000 genomes]
rs72661426	0.90[ASN][1000 genomes]
rs72661427	0.90[ASN][1000 genomes]
rs72661442	1.00[ASN][1000 genomes]
rs72661445	1.00[ASN][1000 genomes]
rs72661495	1.00[ASN][1000 genomes]
rs72663207	1.00[ASN][1000 genomes]
rs72663214	1.00[ASN][1000 genomes]
rs72663216	1.00[ASN][1000 genomes]
rs72663221	1.00[ASN][1000 genomes]
rs72663222	1.00[ASN][1000 genomes]
rs72663223	1.00[ASN][1000 genomes]
rs7833035	0.90[ASN][1000 genomes]
rs7833043	0.90[ASN][1000 genomes]
rs7834199	0.90[ASN][1000 genomes]
rs7837331	0.90[ASN][1000 genomes]
rs7837720	0.81[EUR][1000 genomes]
rs7838137	0.90[ASN][1000 genomes]
rs9650196	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831331	chr8:60770382-60959633	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:60911400-60912600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:60911800-60912800	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell

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