Variant report

Variant	rs10097767
Chromosome Location	chr8:60738561-60738562
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:60738423..60740375-chr8:60748567..60750764,2	K562	blood:

Extended variants
information (count: 62 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:58)

rs_ID	r²[population]
rs10081579	1.00[ASN][1000 genomes]
rs10086808	0.99[EUR][1000 genomes]
rs10094469	0.96[EUR][1000 genomes]
rs10095347	0.99[EUR][1000 genomes]
rs10098915	1.00[ASN][1000 genomes]
rs10109105	0.96[EUR][1000 genomes]
rs10111058	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10957118	0.90[ASN][1000 genomes]
rs1497031	0.96[EUR][1000 genomes]
rs16925397	0.99[EUR][1000 genomes]
rs16925418	0.91[EUR][1000 genomes]
rs17271634	0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1995941	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28445557	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28626870	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28668089	1.00[ASN][1000 genomes]
rs28673143	0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28690268	1.00[ASN][1000 genomes]
rs28834130	0.96[EUR][1000 genomes]
rs29001471	0.99[EUR][1000 genomes]
rs56933815	0.99[EUR][1000 genomes]
rs57344747	1.00[ASN][1000 genomes]
rs62512089	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6997337	1.00[ASN][1000 genomes]
rs6998079	1.00[ASN][1000 genomes]
rs72659716	1.00[ASN][1000 genomes]
rs72659731	1.00[ASN][1000 genomes]
rs72659733	1.00[ASN][1000 genomes]
rs72659760	1.00[ASN][1000 genomes]
rs72659762	1.00[ASN][1000 genomes]
rs72659763	1.00[ASN][1000 genomes]
rs72659765	1.00[ASN][1000 genomes]
rs72659799	1.00[ASN][1000 genomes]
rs72659801	1.00[ASN][1000 genomes]
rs72659802	1.00[ASN][1000 genomes]
rs72661403	1.00[ASN][1000 genomes]
rs72661404	1.00[ASN][1000 genomes]
rs72661406	1.00[ASN][1000 genomes]
rs72661410	1.00[ASN][1000 genomes]
rs72661416	1.00[ASN][1000 genomes]
rs72661421	1.00[ASN][1000 genomes]
rs72661426	1.00[ASN][1000 genomes]
rs72661427	1.00[ASN][1000 genomes]
rs72661442	0.90[ASN][1000 genomes]
rs72661445	0.90[ASN][1000 genomes]
rs72661495	0.90[ASN][1000 genomes]
rs72663207	0.90[ASN][1000 genomes]
rs7819235	0.96[EUR][1000 genomes]
rs7822560	0.99[EUR][1000 genomes]
rs7828325	0.96[EUR][1000 genomes]
rs7832437	0.99[EUR][1000 genomes]
rs7833035	1.00[ASN][1000 genomes]
rs7833043	1.00[ASN][1000 genomes]
rs7834199	1.00[ASN][1000 genomes]
rs7837331	1.00[ASN][1000 genomes]
rs7837720	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7838137	1.00[ASN][1000 genomes]
rs9650196	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030564	chr8:60445016-60752655	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv539630	chr8:60445016-60752655	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	esv3358045	chr8:60715447-60746624	Enhancers	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv982150	chr8:60723448-60742769	Enhancers	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:60738400-60738800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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