Variant report

Variant	rs62512297
Chromosome Location	chr8:59177470-59177471
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs62512263	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs62512270	0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs62512302	0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs62512304	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs62512307	0.90[EUR][1000 genomes]
rs62512308	0.90[EUR][1000 genomes]
rs62512352	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs62514294	0.90[EUR][1000 genomes]
rs62514322	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs62514323	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs62514332	0.87[EUR][1000 genomes]
rs6471694	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59170800-59187800	Weak transcription	Fetal Lung	lung
2	chr8:59173800-59177600	Weak transcription	GM12878-XiMat	blood
3	chr8:59173800-59183600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr8:59176800-59177600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
5	chr8:59177000-59178800	Enhancers	Primary T helper naive cells from peripheral blood	blood
6	chr8:59177000-59178800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
7	chr8:59177000-59179000	Enhancers	Primary T cells fromperipheralblood	blood
8	chr8:59177000-59179200	Enhancers	Primary T cells from cord blood	blood
9	chr8:59177000-59179400	Enhancers	Primary T killer memory cells from peripheral blood	blood
10	chr8:59177200-59177600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
11	chr8:59177200-59178200	Enhancers	Primary T helper cells PMA-I stimulated	--
12	chr8:59177200-59178600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
13	chr8:59177200-59178600	Enhancers	Primary T helper cells fromperipheralblood	blood
14	chr8:59177400-59178200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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