Variant report

Variant	rs62512352
Chromosome Location	chr8:59204693-59204694
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs62512263	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs62512270	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs62512297	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs62512302	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs62512304	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62512307	0.97[EUR][1000 genomes]
rs62512308	0.97[EUR][1000 genomes]
rs62514294	0.97[EUR][1000 genomes]
rs62514322	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62514323	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62514332	0.94[EUR][1000 genomes]
rs6471694	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761427	chr8:59204373-59242564	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59204400-59205600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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