The 2.0 version of rSNPBase

Variant report

Variant rs62521280
Chromosome Location chr8:124543368-124543369
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:124510200-124549200 Weak transcription Fetal Brain Male brain
2 chr8:124515600-124543600 Weak transcription Brain Germinal Matrix brain
3 chr8:124530000-124547200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr8:124530000-124547600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr8:124530400-124546200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr8:124531000-124546000 Genic enhancers Skeletal Muscle Male skeletal muscle
7 chr8:124532200-124543600 Genic enhancers Skeletal Muscle Female skeletal muscle
8 chr8:124533400-124543600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr8:124533800-124552000 Weak transcription Primary hematopoietic stem cells blood
10 chr8:124534400-124543600 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr8:124535400-124543600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr8:124535600-124543600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr8:124536400-124545600 Strong transcription Primary T helper cells fromperipheralblood blood
14 chr8:124536600-124543600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr8:124536800-124545600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
16 chr8:124537200-124543600 Weak transcription Fetal Muscle Trunk muscle
17 chr8:124537600-124543400 Weak transcription Colonic Mucosa Colon
18 chr8:124538000-124543600 Weak transcription Duodenum Mucosa Duodenum
19 chr8:124538200-124545400 Genic enhancers Stomach Smooth Muscle stomach
20 chr8:124538200-124547200 Weak transcription Small Intestine intestine
21 chr8:124538400-124546800 Weak transcription Stomach Mucosa stomach
22 chr8:124538400-124552200 Weak transcription Primary B cells from cord blood blood
23 chr8:124538800-124545000 Strong transcription Brain Cingulate Gyrus brain
24 chr8:124538800-124545600 Strong transcription Primary T regulatory cells fromperipheralblood blood
25 chr8:124539200-124546800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr8:124540200-124545600 Strong transcription Brain Hippocampus Middle brain
27 chr8:124540400-124545200 Strong transcription Primary T killer memory cells from peripheral blood blood
28 chr8:124540400-124545400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
29 chr8:124540600-124545000 Strong transcription Sigmoid Colon Sigmoid Colon
30 chr8:124540800-124543600 Weak transcription Psoas Muscle Psoas
31 chr8:124541200-124546600 Weak transcription Fetal Lung lung
32 chr8:124541400-124543800 Genic enhancers HMEC breast
33 chr8:124541800-124543800 Enhancers Placenta Placenta
34 chr8:124541800-124545600 Strong transcription Rectal Mucosa Donor 29 rectum
35 chr8:124542000-124545000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr8:124542200-124544200 Strong transcription Aorta Aorta
37 chr8:124542200-124544600 Strong transcription Cortex derived primary cultured neurospheres brain
38 chr8:124542200-124544600 Strong transcription Fetal Intestine Small intestine
39 chr8:124542200-124544600 Strong transcription Pancreas Pancrea
40 chr8:124542200-124544800 Strong transcription Liver Liver
41 chr8:124542200-124544800 Strong transcription Lung lung
42 chr8:124542200-124545400 Strong transcription Brain Angular Gyrus brain
43 chr8:124542200-124545400 Strong transcription Fetal Intestine Large intestine
44 chr8:124542200-124545400 Strong transcription Rectal Mucosa Donor 31 rectum
45 chr8:124542200-124545400 Strong transcription Thymus Thymus
46 chr8:124542200-124545800 Strong transcription Brain Substantia Nigra brain
47 chr8:124542200-124546200 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
48 chr8:124542400-124543600 Genic enhancers Breast Myoepithelial Primary Cells Breast
49 chr8:124542400-124543600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr8:124542400-124544800 Strong transcription Fetal Brain Female brain

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Last update: Aug 31, 2015