The 2.0 version of rSNPBase

Variant report

Variant rs62559169
Chromosome Location chr9:116666005-116666006
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:116649800-116668600 Weak transcription H9 Cell Line embryonic stem cell
2 chr9:116651000-116668000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr9:116651200-116675000 Weak transcription Colon Smooth Muscle Colon
4 chr9:116652200-116668400 Weak transcription NH-A brain
5 chr9:116653200-116668400 Weak transcription NHLF lung
6 chr9:116653200-116669600 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr9:116653200-116671800 Weak transcription Fetal Lung lung
8 chr9:116653400-116669000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr9:116653800-116669000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr9:116653800-116674000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr9:116654400-116668200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr9:116658000-116668400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr9:116659400-116685400 Weak transcription A549 lung
14 chr9:116660400-116668000 Weak transcription HMEC breast
15 chr9:116660600-116668400 Weak transcription HUVEC blood vessel
16 chr9:116661800-116668000 Weak transcription Pancreas Pancrea
17 chr9:116661800-116669200 Weak transcription Lung lung
18 chr9:116662000-116671400 Weak transcription Right Ventricle heart
19 chr9:116663400-116667400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr9:116664000-116668600 Weak transcription HSMM muscle
21 chr9:116664000-116669000 Weak transcription Aorta Aorta
22 chr9:116664000-116669000 Weak transcription Gastric stomach
23 chr9:116664000-116669600 Weak transcription Fetal Intestine Small intestine
24 chr9:116664000-116674400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr9:116664200-116666200 ZNF genes & repeats Primary hematopoietic stem cells blood
26 chr9:116664200-116667000 Weak transcription Psoas Muscle Psoas
27 chr9:116664200-116668600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr9:116664200-116669400 Weak transcription Ovary ovary
29 chr9:116664400-116668400 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr9:116664400-116668400 Weak transcription NHDF-Ad bronchial
31 chr9:116664400-116668600 Weak transcription HSMMtube muscle
32 chr9:116664400-116669000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr9:116664400-116669000 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr9:116664400-116669200 Weak transcription Fetal Stomach stomach
35 chr9:116664400-116669400 Weak transcription Spleen Spleen
36 chr9:116664400-116669600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr9:116664400-116669600 Weak transcription Fetal Muscle Trunk muscle
38 chr9:116665000-116666400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
39 chr9:116665400-116666200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
40 chr9:116665800-116668400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr9:116666000-116668200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr9:116666000-116669000 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015