The 2.0 version of rSNPBase

Variant report

Variant rs626216
Chromosome Location chr11:93552329-93552330
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:93533000-93555600 Weak transcription Small Intestine intestine
2 chr11:93543000-93553200 Weak transcription Aorta Aorta
3 chr11:93543000-93554400 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr11:93544600-93552800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr11:93546200-93553200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr11:93546400-93553000 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr11:93546400-93553600 Weak transcription HepG2 liver
8 chr11:93546400-93554200 Weak transcription Colonic Mucosa Colon
9 chr11:93546400-93566200 Weak transcription Brain Angular Gyrus brain
10 chr11:93546600-93552400 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr11:93546600-93554200 Weak transcription K562 blood
12 chr11:93547400-93553400 Weak transcription Ovary ovary
13 chr11:93547800-93552800 Weak transcription H1 Cell Line embryonic stem cell
14 chr11:93547800-93553600 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr11:93547800-93553600 Weak transcription HSMMtube muscle
16 chr11:93547800-93554200 Weak transcription Brain Cingulate Gyrus brain
17 chr11:93547800-93554400 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr11:93548000-93552600 Weak transcription Muscle Satellite Cultured Cells --
19 chr11:93548000-93555800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr11:93548200-93552800 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr11:93548200-93553600 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr11:93548400-93552400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr11:93548400-93553600 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr11:93548400-93554200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr11:93548800-93553200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr11:93549000-93552400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr11:93549000-93553400 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr11:93549200-93552400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr11:93549200-93552800 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr11:93549200-93552800 Weak transcription Fetal Intestine Large intestine
31 chr11:93549200-93552800 Weak transcription Lung lung
32 chr11:93549200-93553200 Weak transcription GM12878-XiMat blood
33 chr11:93549200-93553600 Weak transcription Primary T cells fromperipheralblood blood
34 chr11:93549200-93553600 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr11:93549200-93553600 Weak transcription Brain Substantia Nigra brain
36 chr11:93549200-93553800 Weak transcription HSMM muscle
37 chr11:93549200-93554400 Weak transcription Brain Anterior Caudate brain
38 chr11:93549200-93554600 Weak transcription Placenta Placenta
39 chr11:93549200-93555800 Weak transcription Osteobl bone
40 chr11:93549200-93559200 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr11:93549400-93552600 Weak transcription Fetal Lung lung
42 chr11:93549400-93552800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr11:93549400-93552800 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr11:93549400-93553200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr11:93549400-93553400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr11:93549400-93554000 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr11:93549600-93552400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr11:93549800-93552600 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr11:93550400-93554200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr11:93550800-93552400 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015