Variant report

Variant	rs626931
Chromosome Location	chr6:141178958-141178959
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	FOS	chr6:141178844-141180008	HUVEC	blood vessel:	n/a	chr6:141179155-141179163 chr6:141179153-141179164
2	RAD21	chr6:141178921-141179283	SK-N-SH_RA	brain:	n/a	n/a
3	NR3C1	chr6:141178863-141179631	A549	lung:	n/a	chr6:141179401-141179417 chr6:141179050-141179067 chr6:141179396-141179422 chr6:141179402-141179416 chr6:141179396-141179422 chr6:141179402-141179416 chr6:141179396-141179422 chr6:141179401-141179416 chr6:141179400-141179418 chr6:141179399-141179420 chr6:141179396-141179422 chr6:141179401-141179417 chr6:141179402-141179416 chr6:141179396-141179422 chr6:141179401-141179417
4	USF1	chr6:141178897-141179250	SK-N-SH_RA	brain:	n/a	chr6:141179125-141179136
5	USF1	chr6:141178829-141179323	A549	lung:	n/a	chr6:141179125-141179136
6	JUN	chr6:141178908-141179305	HUVEC	blood vessel:	n/a	chr6:141179155-141179163
7	USF1	chr6:141178914-141179335	ECC-1	luminal epithelium:	n/a	chr6:141179125-141179136
8	TCF12	chr6:141178751-141179852	SK-N-SH	brain:	n/a	chr6:141178858-141178867
9	CTCF	chr6:141178920-141179070	HCPEpiC	choroid plexus:	n/a	n/a
10	EP300	chr6:141178796-141180068	SK-N-SH	brain:	n/a	chr6:141179539-141179549 chr6:141179354-141179368 chr6:141179063-141179077 chr6:141179297-141179311
11	JUND	chr6:141178894-141179494	SK-N-SH	brain:	n/a	chr6:141179155-141179163
12	POLR2A	chr6:141178776-141179181	MCF10A-Er-Src	breast:	n/a	n/a
13	FOXA1	chr6:141178925-141179282	A549	lung:	n/a	n/a
14	RXRA	chr6:141178948-141179448	SK-N-SH	brain:	n/a	n/a
15	PBX3	chr6:141178773-141179903	SK-N-SH	brain:	n/a	n/a
16	NR3C1	chr6:141178894-141179216	A549	lung:	n/a	chr6:141179050-141179067
17	EP300	chr6:141178863-141179315	SK-N-SH_RA	brain:	n/a	chr6:141179063-141179077 chr6:141179297-141179311
18	FOSL2	chr6:141178904-141179417	SK-N-SH	brain:	n/a	chr6:141179155-141179163
19	NR3C1	chr6:141178814-141179233	A549	lung:	n/a	chr6:141179050-141179067
20	STAT3	chr6:141178581-141179403	MCF10A-Er-Src	breast:	n/a	n/a
21	MYC	chr6:141178911-141179311	MCF10A-Er-Src	breast:	n/a	chr6:141179154-141179163 chr6:141179126-141179135
22	FOS	chr6:141178831-141179988	MCF10A-Er-Src	breast:	n/a	chr6:141179155-141179163 chr6:141179153-141179164
23	CTCF	chr6:141178920-141179070	BJ	skin:	n/a	n/a
24	POLR2A	chr6:141178927-141179098	SK-N-SH	brain:	n/a	n/a
25	CTCF	chr6:141178920-141179190	NHDF-neo	bronchial:	n/a	n/a
26	GATA3	chr6:141178777-141179933	SK-N-SH	brain:	n/a	n/a
27	USF1	chr6:141178935-141179321	A549	lung:	n/a	chr6:141179125-141179136
28	GATA3	chr6:141178754-141180085	SK-N-SH	brain:	n/a	n/a
29	USF1	chr6:141178896-141179216	A549	lung:	n/a	chr6:141179125-141179136
30	FOS	chr6:141178899-141179928	MCF10A-Er-Src	breast:	n/a	chr6:141179155-141179163 chr6:141179153-141179164
31	TCF12	chr6:141178703-141179438	SK-N-SH	brain:	n/a	chr6:141178858-141178867
32	USF2	chr6:141178940-141179309	Hela-S3	cervix:	n/a	chr6:141179125-141179136
33	JUND	chr6:141178954-141179917	Hela-S3	cervix:	n/a	chr6:141179155-141179163
34	POLR2A	chr6:141178814-141179256	HUVEC	blood vessel:	n/a	n/a
35	JUND	chr6:141178923-141180227	HCT-116	colon:	n/a	chr6:141179155-141179163
36	USF1	chr6:141178922-141179241	A549	lung:	n/a	chr6:141179125-141179136
37	NR3C1	chr6:141178895-141179192	A549	lung:	n/a	chr6:141179050-141179067
38	CEBPB	chr6:141178787-141179735	IMR90	lung:	n/a	chr6:141179299-141179310 chr6:141178917-141178930 chr6:141179300-141179311 chr6:141179299-141179312 chr6:141179299-141179312 chr6:141179299-141179310 chr6:141179357-141179368
39	FOSL2	chr6:141178819-141179370	A549	lung:	n/a	chr6:141179155-141179163
40	USF1	chr6:141178916-141179308	SK-N-SH	brain:	n/a	chr6:141179125-141179136
41	EP300	chr6:141178933-141179271	SK-N-SH_RA	brain:	n/a	chr6:141179063-141179077
42	USF1	chr6:141178781-141179449	SK-N-SH	brain:	n/a	chr6:141179125-141179136
43	NR3C1	chr6:141178917-141179201	A549	lung:	n/a	chr6:141179050-141179067
44	CTCF	chr6:141178940-141179090	NHDF-neo	bronchial:	n/a	n/a
45	POLR2A	chr6:141178904-141179149	Hela-S3	cervix:	n/a	n/a
46	RAD21	chr6:141178922-141179463	IMR90	lung:	n/a	n/a
47	STAT3	chr6:141178910-141179353	MCF10A-Er-Src	breast:	n/a	n/a
48	MYC	chr6:141178857-141180057	MCF10A-Er-Src	breast:	n/a	chr6:141179154-141179163 chr6:141179126-141179135
49	CEBPB	chr6:141178889-141179901	Hela-S3	cervix:	n/a	chr6:141179299-141179310 chr6:141178917-141178930 chr6:141179300-141179311 chr6:141179299-141179312 chr6:141179299-141179312 chr6:141179299-141179310 chr6:141179357-141179368
50	JUND	chr6:141178803-141180116	SK-N-SH	brain:	n/a	chr6:141179155-141179163

Variant related genes	Relation type
ENSG00000234147	TF binding region

Extended variants
information (count: 133 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:101)

rs_ID	r²[population]
rs10499221	0.90[CHB][hapmap];0.89[JPT][hapmap]
rs1074714	0.86[ASN][1000 genomes]
rs1206454	0.84[AFR][1000 genomes]
rs1206455	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1402509	0.86[ASN][1000 genomes]
rs1521136	0.85[CHB][hapmap];0.90[JPT][hapmap]
rs1568482	0.90[CHB][hapmap];0.89[JPT][hapmap]
rs1568483	0.86[CHB][hapmap];0.90[JPT][hapmap]
rs2143604	0.86[ASN][1000 genomes]
rs2206790	0.86[ASN][1000 genomes]
rs2223705	0.86[ASN][1000 genomes]
rs582203	0.90[ASN][1000 genomes]
rs583551	0.90[ASN][1000 genomes]
rs584505	0.90[ASN][1000 genomes]
rs584727	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs585656	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs586523	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs587825	0.86[ASN][1000 genomes]
rs590595	0.88[ASN][1000 genomes]
rs593101	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs594332	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs594433	0.86[ASN][1000 genomes]
rs594761	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs596276	0.86[ASN][1000 genomes]
rs596721	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs599266	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs599901	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs599928	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs600540	1.00[CEU][hapmap];0.80[JPT][hapmap];0.95[EUR][1000 genomes]
rs601084	0.90[ASN][1000 genomes]
rs605384	0.89[ASN][1000 genomes]
rs606180	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs607855	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs608138	0.84[ASN][1000 genomes]
rs609656	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs610619	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs611438	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs612305	0.91[ASN][1000 genomes]
rs612726	0.92[EUR][1000 genomes]
rs612960	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs613070	0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs613253	0.86[ASN][1000 genomes]
rs613931	0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs615207	0.91[ASN][1000 genomes]
rs617946	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs618406	0.83[ASN][1000 genomes]
rs618795	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs620151	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs623190	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs623571	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs625897	0.86[ASN][1000 genomes]
rs627452	0.91[ASN][1000 genomes]
rs627812	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs629205	0.91[ASN][1000 genomes]
rs629223	0.87[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs629607	0.88[ASN][1000 genomes]
rs630383	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs630596	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs631576	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs632617	0.88[ASN][1000 genomes]
rs633796	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs637822	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs640567	0.86[ASN][1000 genomes]
rs641364	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs641720	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs643403	0.84[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs643558	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs644443	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs644638	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs645537	0.95[EUR][1000 genomes]
rs646921	0.88[ASN][1000 genomes]
rs647781	0.90[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs647875	0.91[ASN][1000 genomes]
rs650907	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs653656	0.86[ASN][1000 genomes]
rs655154	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs655386	0.86[ASN][1000 genomes]
rs656160	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs656512	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6570418	0.86[ASN][1000 genomes]
rs6570419	0.85[ASN][1000 genomes]
rs6570420	0.86[ASN][1000 genomes]
rs659647	0.86[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs664281	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs665541	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs669528	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs670375	0.80[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs672301	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs672906	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs673799	0.88[ASN][1000 genomes]
rs677319	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs681758	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs685606	0.95[EUR][1000 genomes]
rs687815	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs687879	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs688310	0.80[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6911804	0.85[ASN][1000 genomes]
rs7759288	0.80[ASN][1000 genomes]
rs7763057	0.86[ASN][1000 genomes]
rs7774722	0.80[ASN][1000 genomes]
rs9484432	0.85[CHB][hapmap];0.88[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:32 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026042	chr6:140813667-141414842	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	nsv869287	chr6:140826709-141407102	Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
3	nsv886697	chr6:140878731-141182209	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
4	nsv886698	chr6:140878731-141194073	ZNF genes & repeats Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
5	nsv886699	chr6:140878731-141209198	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
6	nsv886705	chr6:140902819-141194073	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
7	nsv886706	chr6:140902819-141209198	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
8	nsv886707	chr6:140902819-141301076	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
9	nsv886710	chr6:140911389-141194073	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
10	nsv886711	chr6:140911389-141209198	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
11	nsv604775	chr6:140948427-141219060	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
12	nsv886715	chr6:140968292-141188478	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
13	nsv886716	chr6:140968292-141209198	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
14	nsv1021789	chr6:141024733-141284394	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
15	nsv1019459	chr6:141051249-141862727	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
16	nsv538453	chr6:141051249-141862727	ZNF genes & repeats Flanking Active TSS Strong transcription Weak transcription Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
17	nsv532070	chr6:141057326-141865359	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
18	nsv604779	chr6:141063235-141241876	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
19	esv2830172	chr6:141079124-141364472	Flanking Active TSS Enhancers Active TSS Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
20	nsv1025922	chr6:141090901-141865360	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
21	nsv538454	chr6:141090901-141865360	Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
22	nsv1028540	chr6:141121435-141740831	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
23	nsv604780	chr6:141126080-141740918	Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
24	nsv1033387	chr6:141130072-141742682	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
25	nsv1030686	chr6:141130072-141749079	Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
26	nsv1024981	chr6:141134064-141742682	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
27	nsv886719	chr6:141142653-141211011	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
28	nsv916684	chr6:141149976-141682411	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
29	nsv532071	chr6:141150099-141682503	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
30	nsv1035133	chr6:141156919-141650334	Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
31	nsv1029033	chr6:141156919-141740831	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
32	nsv604781	chr6:141165191-141219060	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:141165000-141188400	Weak transcription	HepG2	liver
2	chr6:141167600-141183000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr6:141171800-141179000	Weak transcription	HSMM	muscle
4	chr6:141175800-141179000	Weak transcription	Colon Smooth Muscle	Colon
5	chr6:141175800-141179400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr6:141176000-141179000	Weak transcription	Rectal Smooth Muscle	rectum
7	chr6:141176400-141180000	Enhancers	HUVEC	blood vessel
8	chr6:141176800-141179400	Enhancers	Muscle Satellite Cultured Cells	--
9	chr6:141177200-141179000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr6:141177200-141179000	Weak transcription	HMEC	breast
11	chr6:141177200-141179400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr6:141177600-141179400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr6:141178200-141180000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr6:141178200-141180000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr6:141178400-141180000	Enhancers	Brain Substantia Nigra	brain
16	chr6:141178400-141180000	Enhancers	NHDF-Ad	bronchial
17	chr6:141178400-141180800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr6:141178600-141179000	Enhancers	Brain Angular Gyrus	brain
19	chr6:141178600-141179400	Enhancers	NHEK	skin
20	chr6:141178600-141179600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr6:141178600-141179600	Enhancers	Adipose Nuclei	Adipose
22	chr6:141178600-141179600	Enhancers	Duodenum Smooth Muscle	Duodenum
23	chr6:141178600-141179800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
24	chr6:141178600-141179800	Enhancers	Cortex derived primary cultured neurospheres	brain
25	chr6:141178600-141179800	Enhancers	Pancreatic Islets	Pancreatic Islet
26	chr6:141178600-141179800	Enhancers	NHLF	lung
27	chr6:141178600-141180000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
28	chr6:141178600-141180000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr6:141178600-141180000	Enhancers	Brain Anterior Caudate	brain
30	chr6:141178600-141180000	Enhancers	Brain Hippocampus Middle	brain
31	chr6:141178600-141180000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
32	chr6:141178600-141180000	Enhancers	Monocytes-CD14+_RO01746	blood
33	chr6:141178600-141180000	Enhancers	NH-A	brain
34	chr6:141178600-141180000	Enhancers	Osteobl	bone
35	chr6:141178600-141180200	Enhancers	Hela-S3	cervix

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