The 2.0 version of rSNPBase

Variant report

Variant rs627549
Chromosome Location chr1:78640109-78640110
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:16 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:78625200-78644400 Weak transcription Pancreas Pancrea
2 chr1:78635000-78646200 Weak transcription Fetal Intestine Small intestine
3 chr1:78638400-78641800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr1:78638400-78641800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr1:78638600-78641600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr1:78638600-78641600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:78638600-78641800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr1:78638600-78641800 Weak transcription HSMM muscle
9 chr1:78638600-78641800 Weak transcription NHDF-Ad bronchial
10 chr1:78638600-78641800 Weak transcription NHEK skin
11 chr1:78638600-78641800 Weak transcription Osteobl bone
12 chr1:78638600-78642000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr1:78638800-78641800 Weak transcription HMEC breast
14 chr1:78638800-78642000 Weak transcription Muscle Satellite Cultured Cells --
15 chr1:78638800-78642000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr1:78639000-78641600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015