The 2.0 version of rSNPBase

Variant report

Variant rs672391
Chromosome Location chr1:78609311-78609312
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:78584200-78630600 Weak transcription Fetal Adrenal Gland Adrenal Gland
2 chr1:78607200-78609600 Enhancers Fetal Intestine Large intestine
3 chr1:78607200-78609600 Enhancers Rectal Mucosa Donor 31 rectum
4 chr1:78607200-78609800 Enhancers Small Intestine intestine
5 chr1:78608400-78609400 Genic enhancers Fetal Intestine Small intestine
6 chr1:78608400-78609600 Flanking Active TSS GM12878-XiMat blood
7 chr1:78608600-78609400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
8 chr1:78608600-78609400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr1:78608600-78609400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr1:78608600-78609400 Flanking Active TSS Duodenum Mucosa Duodenum
11 chr1:78608600-78610200 Enhancers HepG2 liver
12 chr1:78608800-78609400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
13 chr1:78608800-78609400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
14 chr1:78608800-78609400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
15 chr1:78608800-78609400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
16 chr1:78608800-78609400 Active TSS NHDF-Ad bronchial
17 chr1:78608800-78609600 Active TSS A549 lung
18 chr1:78608800-78614600 Weak transcription Psoas Muscle Psoas
19 chr1:78609000-78609400 Active TSS Primary T helper memory cells from peripheral blood 2 blood
20 chr1:78609000-78609400 Active TSS Primary Natural Killer cells fromperipheralblood blood
21 chr1:78609000-78609400 Enhancers NHLF lung
22 chr1:78609000-78609600 Enhancers Stomach Mucosa stomach
23 chr1:78609000-78609800 Enhancers Primary B cells from peripheral blood blood
24 chr1:78609000-78618000 Weak transcription Colonic Mucosa Colon
25 chr1:78609200-78609400 Active TSS Primary T cells fromperipheralblood blood
26 chr1:78609200-78609400 Enhancers Primary hematopoietic stem cells blood
27 chr1:78609200-78609400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
28 chr1:78609200-78609400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
29 chr1:78609200-78609400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
30 chr1:78609200-78609400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
31 chr1:78609200-78609400 Active TSS Duodenum Smooth Muscle Duodenum
32 chr1:78609200-78609400 Flanking Active TSS Pancreatic Islets Pancreatic Islet
33 chr1:78609200-78609400 Enhancers Dnd41 blood
34 chr1:78609200-78609600 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
35 chr1:78609200-78609600 Active TSS Liver Liver
36 chr1:78609200-78610600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr1:78609200-78611000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:78609200-78624600 Weak transcription Pancreas Pancrea
39 chr1:78609200-78624800 Weak transcription Sigmoid Colon Sigmoid Colon

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015