The 2.0 version of rSNPBase

Variant report

Variant rs6427186
Chromosome Location chr1:169368562-169368563
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169338200-169369000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:169350200-169368600 Weak transcription Colonic Mucosa Colon
3 chr1:169353000-169369800 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr1:169354000-169370000 Weak transcription Aorta Aorta
5 chr1:169354800-169370600 Weak transcription Fetal Kidney kidney
6 chr1:169359600-169369800 Weak transcription NHDF-Ad bronchial
7 chr1:169360600-169372200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:169360800-169369200 Weak transcription Fetal Intestine Small intestine
9 chr1:169360800-169370600 Weak transcription NHLF lung
10 chr1:169360800-169395200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr1:169361400-169369400 Weak transcription Rectal Smooth Muscle rectum
12 chr1:169362200-169370000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr1:169362200-169370000 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr1:169362200-169371200 Weak transcription Brain Inferior Temporal Lobe brain
15 chr1:169362400-169368800 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr1:169362400-169369800 Weak transcription Fetal Thymus thymus
17 chr1:169362400-169370000 Weak transcription Brain Germinal Matrix brain
18 chr1:169362400-169370000 Weak transcription Fetal Brain Female brain
19 chr1:169362600-169369600 Weak transcription Primary T cells from cord blood blood
20 chr1:169363400-169368800 Weak transcription Primary hematopoietic stem cells blood
21 chr1:169363400-169371200 Weak transcription Ovary ovary
22 chr1:169363600-169368800 Weak transcription Muscle Satellite Cultured Cells --
23 chr1:169363800-169368600 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr1:169364000-169369000 Weak transcription Brain Angular Gyrus brain
25 chr1:169364200-169368600 Weak transcription HMEC breast
26 chr1:169364400-169375600 Weak transcription Brain Anterior Caudate brain
27 chr1:169364600-169369000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr1:169364800-169368600 Weak transcription Brain Cingulate Gyrus brain
29 chr1:169365400-169368800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr1:169365400-169369000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr1:169365400-169370200 Weak transcription NH-A brain
32 chr1:169365600-169370800 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr1:169365600-169371000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr1:169365600-169371200 Weak transcription Fetal Lung lung
35 chr1:169365800-169372400 Weak transcription HSMM muscle
36 chr1:169366000-169368800 Weak transcription Placenta Placenta
37 chr1:169366000-169369000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr1:169366000-169369200 Weak transcription Adipose Nuclei Adipose
39 chr1:169366000-169369400 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr1:169366000-169370400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr1:169366200-169369000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr1:169366200-169369000 Weak transcription Liver Liver
43 chr1:169366200-169369600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr1:169366200-169370000 Weak transcription Monocytes-CD14+_RO01746 blood
45 chr1:169367400-169369000 Weak transcription Primary monocytes fromperipheralblood blood
46 chr1:169367400-169369000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr1:169367400-169370000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr1:169367400-169370200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr1:169367800-169368800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr1:169368200-169371000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015