The 2.0 version of rSNPBase

Variant report

Variant rs6690801
Chromosome Location chr1:169366209-169366210
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169338200-169369000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:169341200-169367400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr1:169345800-169366400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr1:169349400-169367400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr1:169350200-169366800 Weak transcription HSMMtube muscle
6 chr1:169350200-169368600 Weak transcription Colonic Mucosa Colon
7 chr1:169352800-169367400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr1:169353000-169369800 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr1:169354000-169370000 Weak transcription Aorta Aorta
10 chr1:169354800-169370600 Weak transcription Fetal Kidney kidney
11 chr1:169357000-169368200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:169358200-169368000 Weak transcription Esophagus oesophagus
13 chr1:169359200-169366800 Weak transcription Fetal Brain Male brain
14 chr1:169359200-169368400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr1:169359600-169369800 Weak transcription NHDF-Ad bronchial
16 chr1:169360600-169372200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr1:169360800-169367400 Weak transcription H1 Cell Line embryonic stem cell
18 chr1:169360800-169367800 Weak transcription Psoas Muscle Psoas
19 chr1:169360800-169369200 Weak transcription Fetal Intestine Small intestine
20 chr1:169360800-169370600 Weak transcription NHLF lung
21 chr1:169360800-169395200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr1:169361000-169366600 Weak transcription Colon Smooth Muscle Colon
23 chr1:169361200-169366800 Weak transcription Hela-S3 cervix
24 chr1:169361400-169368000 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr1:169361400-169369400 Weak transcription Rectal Smooth Muscle rectum
26 chr1:169361800-169366800 Weak transcription Brain Substantia Nigra brain
27 chr1:169362200-169367000 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr1:169362200-169367400 Weak transcription Placenta Amnion Placenta Amnion
29 chr1:169362200-169370000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:169362200-169370000 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr1:169362200-169371200 Weak transcription Brain Inferior Temporal Lobe brain
32 chr1:169362400-169366400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr1:169362400-169368000 Weak transcription Brain Hippocampus Middle brain
34 chr1:169362400-169368800 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr1:169362400-169369800 Weak transcription Fetal Thymus thymus
36 chr1:169362400-169370000 Weak transcription Brain Germinal Matrix brain
37 chr1:169362400-169370000 Weak transcription Fetal Brain Female brain
38 chr1:169362600-169369600 Weak transcription Primary T cells from cord blood blood
39 chr1:169363200-169368200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:169363400-169368800 Weak transcription Primary hematopoietic stem cells blood
41 chr1:169363400-169371200 Weak transcription Ovary ovary
42 chr1:169363600-169367800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr1:169363600-169368800 Weak transcription Muscle Satellite Cultured Cells --
44 chr1:169363800-169367000 Weak transcription NHEK skin
45 chr1:169363800-169367400 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr1:169363800-169367800 Weak transcription Fetal Muscle Trunk muscle
47 chr1:169363800-169368600 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr1:169364000-169369000 Weak transcription Brain Angular Gyrus brain
49 chr1:169364200-169366800 Weak transcription Fetal Muscle Leg muscle
50 chr1:169364200-169367200 Weak transcription Primary B cells from cord blood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015