Variant report

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10017677	0.81[CEU][hapmap]
rs10021918	0.81[CEU][hapmap]
rs10025240	0.81[CEU][hapmap]
rs10025379	0.81[CEU][hapmap]
rs10027692	0.81[CEU][hapmap]
rs10028342	0.83[CEU][hapmap]
rs10050095	0.83[CEU][hapmap]
rs10517169	0.83[CEU][hapmap]
rs1160093	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12508654	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13110516	0.83[CEU][hapmap]
rs13114476	0.83[CEU][hapmap]
rs13115057	0.81[CEU][hapmap]
rs13126445	0.81[CEU][hapmap]
rs13138566	0.81[CEU][hapmap]
rs1398170	0.81[CEU][hapmap]
rs1512126	0.83[CEU][hapmap]
rs1512136	0.83[CEU][hapmap]
rs1512138	0.81[CEU][hapmap]
rs17598809	0.83[CEU][hapmap]
rs17599074	0.83[CEU][hapmap]
rs17641065	0.83[CEU][hapmap]
rs17641171	0.83[CEU][hapmap]
rs6818817	0.83[CEU][hapmap]
rs6819625	0.81[CEU][hapmap]
rs6842375	0.81[CEU][hapmap]
rs6847258	0.81[CEU][hapmap]
rs7678338	0.83[CEU][hapmap]
rs7679715	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.88[YRI][hapmap]
rs7683996	0.81[CEU][hapmap]
rs7691100	0.83[CEU][hapmap]
rs9291292	0.81[CEU][hapmap]
rs9291294	0.85[CHB][hapmap]
rs9291295	0.80[CEU][hapmap]
rs9291296	0.83[CEU][hapmap]
rs9291297	0.83[CEU][hapmap]
rs953380	0.83[CEU][hapmap]
rs9992220	0.83[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879002	chr4:46911379-46940376	Weak transcription Enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv1833067	chr4:46919749-46929104	Weak transcription Enhancers	lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:46926600-46932800	Weak transcription	Brain Anterior Caudate	brain
2	chr4:46928600-46929800	Enhancers	Fetal Heart	heart

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