Variant report

Variant rs6455888
Chromosome Location chr6:163684291-163684292
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:163680000-163686600 Enhancers Fetal Heart heart
2 chr6:163681200-163685400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr6:163681400-163685200 Weak transcription Pancreas Pancrea
4 chr6:163681800-163685000 Weak transcription Liver Liver
5 chr6:163682000-163685400 Weak transcription Esophagus oesophagus
6 chr6:163682000-163686200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
7 chr6:163682000-163686400 Enhancers Brain Cingulate Gyrus brain
8 chr6:163682000-163686400 Enhancers Brain Substantia Nigra brain
9 chr6:163682000-163701600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr6:163682200-163684800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
11 chr6:163682200-163685400 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr6:163682200-163685400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr6:163682200-163685600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
14 chr6:163682200-163685800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr6:163682200-163686600 Enhancers Brain Hippocampus Middle brain
16 chr6:163682600-163688000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr6:163682800-163684400 Enhancers HUES6 Cell Line embryonic stem cell
18 chr6:163682800-163686400 Enhancers H1 Cell Line embryonic stem cell
19 chr6:163683200-163686400 Enhancers Cortex derived primary cultured neurospheres brain
20 chr6:163683400-163685800 Enhancers Brain Germinal Matrix brain
21 chr6:163683600-163684600 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr6:163683600-163685200 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr6:163683600-163685600 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr6:163683600-163686400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
25 chr6:163683800-163684400 Enhancers Fetal Muscle Trunk muscle
26 chr6:163683800-163684400 Enhancers Right Ventricle heart
27 chr6:163683800-163684600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
28 chr6:163683800-163685200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
29 chr6:163683800-163685400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr6:163683800-163686400 Enhancers Left Ventricle heart
31 chr6:163684000-163684400 Enhancers Fetal Muscle Leg muscle
32 chr6:163684000-163685800 Enhancers Adipose Nuclei Adipose
33 chr6:163684000-163686000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr6:163684000-163686000 Enhancers Brain Angular Gyrus brain
35 chr6:163684200-163684400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
36 chr6:163684200-163684400 Enhancers Gastric stomach
37 chr6:163684200-163684600 Flanking Active TSS Brain Anterior Caudate brain
38 chr6:163684200-163684600 Flanking Active TSS Skeletal Muscle Female skeletal muscle
39 chr6:163684200-163685200 Enhancers Brain Inferior Temporal Lobe brain
40 chr6:163684200-163685600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr6:163684200-163685800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
42 chr6:163684200-163685800 Enhancers Skeletal Muscle Male skeletal muscle
43 chr6:163684200-163686000 Enhancers iPS-18 Cell Line embryonic stem cell

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