Variant report
Variant | rs6458970 |
---|---|
Chromosome Location | chr6:53723814-53723815 |
allele | C/T |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:53695000-53743200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
2 | chr6:53703200-53726400 | Weak transcription | Fetal Stomach | stomach |
3 | chr6:53703800-53727600 | Weak transcription | Stomach Smooth Muscle | stomach |
4 | chr6:53709800-53762200 | Weak transcription | Primary B cells from cord blood | blood |
5 | chr6:53717800-53731800 | Weak transcription | Primary hematopoietic stem cells | blood |
6 | chr6:53719800-53727600 | Enhancers | Brain Substantia Nigra | brain |
7 | chr6:53719800-53727800 | Enhancers | Brain Hippocampus Middle | brain |
8 | chr6:53719800-53747800 | Weak transcription | Primary T cells from cord blood | blood |
9 | chr6:53720000-53724000 | Enhancers | Brain Cingulate Gyrus | brain |
10 | chr6:53720000-53724400 | Enhancers | Brain Anterior Caudate | brain |
11 | chr6:53720000-53727600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
12 | chr6:53720600-53741400 | Weak transcription | Dnd41 | blood |
13 | chr6:53720800-53736600 | Weak transcription | Fetal Thymus | thymus |
14 | chr6:53721200-53726200 | Weak transcription | Fetal Intestine Small | intestine |
15 | chr6:53721200-53726400 | Weak transcription | Fetal Intestine Large | intestine |
16 | chr6:53721200-53726600 | Weak transcription | Rectal Smooth Muscle | rectum |
17 | chr6:53721200-53726800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
18 | chr6:53721400-53724200 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
19 | chr6:53721600-53728000 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
20 | chr6:53721800-53725600 | Weak transcription | Aorta | Aorta |
21 | chr6:53721800-53726800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
22 | chr6:53722000-53725000 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
23 | chr6:53722000-53748200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
24 | chr6:53722400-53724000 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
25 | chr6:53722400-53724400 | Enhancers | Brain Inferior Temporal Lobe | brain |
26 | chr6:53722400-53725400 | Weak transcription | H1 Cell Line | embryonic stem cell |
27 | chr6:53722600-53724000 | Weak transcription | Brain Germinal Matrix | brain |
28 | chr6:53722600-53725000 | Enhancers | HUVEC | blood vessel |
29 | chr6:53722600-53725400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
30 | chr6:53722600-53725600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
31 | chr6:53722600-53725600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
32 | chr6:53722800-53724000 | Enhancers | Ovary | ovary |
33 | chr6:53722800-53726200 | Weak transcription | HepG2 | liver |
34 | chr6:53722800-53726400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
35 | chr6:53723000-53725400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
36 | chr6:53723000-53725600 | Weak transcription | Lung | lung |
37 | chr6:53723000-53726200 | Weak transcription | HSMMtube | muscle |
38 | chr6:53723000-53727000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
39 | chr6:53723000-53727200 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
40 | chr6:53723000-53727200 | Enhancers | Brain Angular Gyrus | brain |
41 | chr6:53723000-53728000 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
42 | chr6:53723000-53728000 | Weak transcription | Pancreas | Pancrea |
43 | chr6:53723000-53728000 | Weak transcription | Right Atrium | heart |
44 | chr6:53723200-53725400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
45 | chr6:53723200-53725600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
46 | chr6:53723200-53725600 | Weak transcription | Colon Smooth Muscle | Colon |
47 | chr6:53723200-53725800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
48 | chr6:53723400-53724000 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
49 | chr6:53723400-53726000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
50 | chr6:53723400-53726000 | Weak transcription | HMEC | breast |