Variant report

Variant rs6462943
Chromosome Location chr7:39774681-39774682
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:39773000-39775200 Active TSS GM12878-XiMat blood
2 chr7:39773200-39774800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr7:39773400-39774800 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
4 chr7:39773600-39774800 Weak transcription Lung lung
5 chr7:39773800-39775800 Enhancers Primary monocytes fromperipheralblood blood
6 chr7:39773800-39775800 Enhancers Primary hematopoietic stem cells blood
7 chr7:39773800-39775800 Enhancers Small Intestine intestine
8 chr7:39774000-39774800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
9 chr7:39774000-39774800 Enhancers Adipose Nuclei Adipose
10 chr7:39774000-39775200 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr7:39774000-39775200 Weak transcription Fetal Lung lung
12 chr7:39774000-39775200 Weak transcription Right Ventricle heart
13 chr7:39774000-39775400 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr7:39774000-39775400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr7:39774000-39775600 Enhancers Primary T helper cells PMA-I stimulated --
16 chr7:39774000-39775800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr7:39774000-39776000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
18 chr7:39774000-39776200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr7:39774000-39781600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr7:39774200-39774800 Enhancers H9 Cell Line embryonic stem cell
21 chr7:39774200-39774800 Enhancers Fetal Muscle Trunk muscle
22 chr7:39774200-39774800 Enhancers Skeletal Muscle Male skeletal muscle
23 chr7:39774200-39775200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr7:39774200-39775200 Enhancers Primary B cells from cord blood blood
25 chr7:39774200-39775200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr7:39774200-39775200 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr7:39774200-39775200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr7:39774200-39775200 Weak transcription Brain Anterior Caudate brain
29 chr7:39774200-39775200 Weak transcription Brain Cingulate Gyrus brain
30 chr7:39774200-39775200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
31 chr7:39774200-39775200 Enhancers Duodenum Mucosa Duodenum
32 chr7:39774200-39775200 Weak transcription Left Ventricle heart
33 chr7:39774200-39775200 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr7:39774200-39775200 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr7:39774200-39775200 Weak transcription K562 blood
36 chr7:39774200-39775400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr7:39774200-39775400 Weak transcription iPS-18 Cell Line embryonic stem cell
38 chr7:39774200-39775400 Weak transcription Right Atrium heart
39 chr7:39774200-39775400 Weak transcription Spleen Spleen
40 chr7:39774200-39775400 Enhancers HUVEC blood vessel
41 chr7:39774200-39775600 Enhancers Primary T helper cells fromperipheralblood blood
42 chr7:39774200-39775600 Enhancers Brain Hippocampus Middle brain
43 chr7:39774200-39775600 Weak transcription Colon Smooth Muscle Colon
44 chr7:39774200-39775600 Weak transcription Pancreas Pancrea
45 chr7:39774200-39775800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
46 chr7:39774200-39775800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
47 chr7:39774200-39775800 Enhancers Primary B cells from peripheral blood blood
48 chr7:39774200-39775800 Enhancers Primary T helper naive cells from peripheral blood blood
49 chr7:39774200-39775800 Enhancers Primary T helper 17 cells PMA-I stimulated --
50 chr7:39774200-39775800 Enhancers Cortex derived primary cultured neurospheres brain

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