Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:146993664..146995748-chr7:147006294..147008294,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10229762	1.00[JPT][hapmap]
rs10500174	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap]
rs10952677	1.00[JPT][hapmap]
rs12111644	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs12111864	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs12112963	1.00[JPT][hapmap];0.93[YRI][hapmap]
rs12703890	1.00[JPT][hapmap];0.93[YRI][hapmap];0.94[AFR][1000 genomes]
rs13241146	1.00[JPT][hapmap]
rs1525213	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1603453	1.00[JPT][hapmap]
rs1603455	1.00[JPT][hapmap]
rs1603456	1.00[JPT][hapmap]
rs17170368	1.00[JPT][hapmap]
rs17170371	1.00[JPT][hapmap]
rs17409131	1.00[JPT][hapmap]
rs4726831	1.00[JPT][hapmap];0.87[YRI][hapmap]
rs55979996	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs58628583	0.97[EUR][1000 genomes]
rs6943628	1.00[JPT][hapmap]
rs6977005	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs73467106	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7777057	0.82[CEU][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes]
rs7806237	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933033	chr7:146720301-147081560	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1033898	chr7:146721499-147081768	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
3	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
4	nsv889396	chr7:146854133-147035067	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv1026360	chr7:146988190-147012081	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
6	nsv1033398	chr7:146989035-147101573	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA	1 gene(s)	inside rSNPs	n/a
7	nsv1029946	chr7:146993413-147021947	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:146994400-146995200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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