Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10229762	1.00[JPT][hapmap]
rs10500174	1.00[JPT][hapmap]
rs10952677	1.00[JPT][hapmap]
rs12111644	1.00[JPT][hapmap]
rs12111864	1.00[JPT][hapmap]
rs12112963	1.00[JPT][hapmap]
rs12703882	1.00[CEU][hapmap]
rs12703884	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs12703890	1.00[JPT][hapmap]
rs13232077	1.00[CEU][hapmap]
rs13241146	1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs1525213	1.00[JPT][hapmap]
rs1603453	1.00[JPT][hapmap]
rs1603456	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs17170328	0.82[CEU][hapmap]
rs17170331	1.00[CEU][hapmap]
rs17170336	0.82[CEU][hapmap]
rs17170339	0.82[CEU][hapmap]
rs17170368	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs17170370	1.00[CEU][hapmap]
rs17170371	1.00[JPT][hapmap]
rs17409131	1.00[CEU][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap]
rs35265883	0.84[EUR][1000 genomes]
rs4726831	1.00[JPT][hapmap]
rs6464791	1.00[JPT][hapmap]
rs6943628	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs6977005	1.00[JPT][hapmap]
rs71530773	0.84[EUR][1000 genomes]
rs7777057	1.00[JPT][hapmap]
rs7806237	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs987420	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933033	chr7:146720301-147081560	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1033898	chr7:146721499-147081768	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
3	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
4	nsv889395	chr7:146848251-146969389	Enhancers Active TSS Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
5	nsv889396	chr7:146854133-147035067	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
6	nsv5996	chr7:146905699-146950685	Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:0 , 50 per page) page:

No data

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