Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs12703880	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12703882	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs13232077	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs13237218	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1603455	1.00[CEU][hapmap]
rs1603456	1.00[CEU][hapmap]
rs17170331	1.00[CEU][hapmap]
rs17170336	0.81[EUR][1000 genomes]
rs17170339	1.00[YRI][hapmap]
rs17170368	1.00[CEU][hapmap]
rs17170370	1.00[CEU][hapmap]
rs17409131	1.00[CEU][hapmap]
rs35265883	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6943628	1.00[CEU][hapmap]
rs6945282	0.83[TSI][hapmap]
rs6960557	0.91[TSI][hapmap]
rs6966651	0.81[MKK][hapmap]
rs71530773	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7806237	1.00[CEU][hapmap]
rs924146	0.95[TSI][hapmap]
rs987420	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933033	chr7:146720301-147081560	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1033898	chr7:146721499-147081768	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
3	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
4	nsv889395	chr7:146848251-146969389	Enhancers Active TSS Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
5	nsv889396	chr7:146854133-147035067	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:146890600-146897200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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