Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10100569	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap]
rs10111690	1.00[CEU][hapmap]
rs12547383	1.00[CEU][hapmap]
rs4369017	0.89[EUR][1000 genomes]
rs4404945	1.00[CEU][hapmap]
rs4461928	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[TSI][hapmap]
rs4466429	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs4596683	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[TSI][hapmap]
rs4876511	1.00[CEU][hapmap]
rs72670703	0.82[EUR][1000 genomes]
rs72687622	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs72687625	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs72687627	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs72687630	0.82[EUR][1000 genomes]
rs72687671	0.82[EUR][1000 genomes]
rs72687673	0.82[EUR][1000 genomes]
rs72687685	1.00[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs7813842	0.89[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs7827767	1.00[CEU][hapmap]
rs7828035	1.00[CEU][hapmap];0.80[EUR][1000 genomes]
rs7830103	1.00[CEU][hapmap]
rs7837326	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[TSI][hapmap]
rs7842307	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2754581	chr8:114029421-114419106	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv817379	chr8:114338391-115011632	Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	esv2754463	chr8:114353649-114501547	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv1019362	chr8:114377031-114419106	Active TSS Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	nsv1031488	chr8:114382671-114419106	Weak transcription Enhancers Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:114392800-114393200	Enhancers	Brain Inferior Temporal Lobe	brain
2	chr8:114393000-114393200	Enhancers	Cortex derived primary cultured neurospheres	brain

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