Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10105072	0.83[ASN][1000 genomes]
rs10808502	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11775992	0.82[ASN][1000 genomes]
rs3103984	0.80[ASN][1000 genomes]
rs3890832	0.82[ASN][1000 genomes]
rs3922789	0.81[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs4242588	0.82[ASN][1000 genomes]
rs4242589	0.82[ASN][1000 genomes]
rs4242590	0.82[ASN][1000 genomes]
rs4242591	0.82[ASN][1000 genomes]
rs4339675	0.82[ASN][1000 genomes]
rs4355804	0.82[ASN][1000 genomes]
rs4372031	0.82[ASN][1000 genomes]
rs4512405	0.82[ASN][1000 genomes]
rs4512406	0.82[ASN][1000 genomes]
rs4532625	0.81[ASN][1000 genomes]
rs56097036	0.82[ASN][1000 genomes]
rs6469774	0.82[ASN][1000 genomes]
rs6469776	0.92[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6469777	0.82[ASN][1000 genomes]
rs6469778	0.82[ASN][1000 genomes]
rs6469779	0.82[ASN][1000 genomes]
rs6985025	0.98[ASN][1000 genomes]
rs7007555	0.82[ASN][1000 genomes]
rs7827202	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831444	chr8:119757355-119915966	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
2	nsv891415	chr8:119886923-119921354	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:119903800-119908200	Weak transcription	Fetal Intestine Small	intestine

Quick Search: