The 2.0 version of rSNPBase

Variant report

Variant rs6477961
Chromosome Location chr9:115598447-115598448
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:115565000-115600800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr9:115565600-115600800 Weak transcription HMEC breast
3 chr9:115570600-115608400 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr9:115573400-115598800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr9:115573600-115607800 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr9:115574000-115598600 Weak transcription H1 Cell Line embryonic stem cell
7 chr9:115575000-115600800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr9:115577600-115630400 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr9:115579000-115600800 Weak transcription Fetal Brain Male brain
10 chr9:115580200-115608400 Weak transcription Fetal Kidney kidney
11 chr9:115580600-115601800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr9:115581200-115598600 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr9:115581200-115599200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr9:115582200-115608600 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr9:115582400-115600600 Weak transcription HSMM muscle
16 chr9:115582400-115608600 Weak transcription NHLF lung
17 chr9:115582400-115609000 Weak transcription NHDF-Ad bronchial
18 chr9:115582400-115630000 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr9:115582600-115598600 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr9:115584400-115608800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr9:115587200-115598600 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr9:115591200-115606800 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr9:115591400-115623200 Weak transcription Fetal Heart heart
24 chr9:115592400-115600000 Weak transcription Dnd41 blood
25 chr9:115592600-115607200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr9:115593200-115611000 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr9:115593400-115602600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr9:115593600-115599600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr9:115593600-115607200 Weak transcription Muscle Satellite Cultured Cells --
30 chr9:115593800-115599000 Weak transcription Primary B cells from cord blood blood
31 chr9:115594000-115602800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr9:115594200-115598600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr9:115594200-115598600 Weak transcription Left Ventricle heart
34 chr9:115594200-115598600 Weak transcription Stomach Smooth Muscle stomach
35 chr9:115594200-115598800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr9:115594200-115600600 Enhancers Rectal Mucosa Donor 31 rectum
37 chr9:115594200-115600800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr9:115594200-115603000 Strong transcription Breast Myoepithelial Primary Cells Breast
39 chr9:115594200-115607200 Weak transcription Fetal Thymus thymus
40 chr9:115594200-115610800 Weak transcription Esophagus oesophagus
41 chr9:115594200-115616000 Weak transcription Small Intestine intestine
42 chr9:115594200-115620400 Weak transcription Thymus Thymus
43 chr9:115594200-115634400 Weak transcription NH-A brain
44 chr9:115594400-115598600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr9:115594400-115598600 Weak transcription Right Atrium heart
46 chr9:115594400-115601400 Weak transcription Fetal Brain Female brain
47 chr9:115594400-115608600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
48 chr9:115594400-115626800 Weak transcription Colon Smooth Muscle Colon
49 chr9:115594600-115598600 Weak transcription Osteobl bone
50 chr9:115594600-115599600 Strong transcription Primary monocytes fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015