Variant report

Variant	rs6482032
Chromosome Location	chr10:37641231-37641232
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 60 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:54)

rs_ID	r²[population]
rs10827764	0.86[EUR][1000 genomes]
rs10827767	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10827768	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10827769	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10827773	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11011081	0.82[EUR][1000 genomes]
rs11011091	0.86[EUR][1000 genomes]
rs11011098	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11011099	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11011101	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11011102	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11011103	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11011105	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11011106	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11011113	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11011114	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11814667	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12355499	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12357165	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12359966	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12766568	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12778083	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12778104	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12783534	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1926123	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1926124	0.89[EUR][1000 genomes]
rs2148272	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2296591	0.89[EUR][1000 genomes]
rs2296592	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2296593	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs34239465	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34569813	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34572770	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35027552	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35359976	0.86[EUR][1000 genomes]
rs35706720	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35999186	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4450125	0.89[EUR][1000 genomes]
rs61859281	0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61859309	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61859336	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61859337	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61859341	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61859343	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61865197	0.86[EUR][1000 genomes]
rs6482029	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7069858	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7070285	0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7071495	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7093136	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7093790	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7097277	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs71489135	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7909101	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045454	chr10:37512369-37678936	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	esv2750892	chr10:37525594-37733381	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	esv3441992	chr10:37624992-37659509	ZNF genes & repeats	TF binding region CpG island lncRNA	2 gene(s)	inside rSNPs	diseases
4	esv3321462	chr10:37625633-37660312	ZNF genes & repeats	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
5	esv3321473	chr10:37625633-37660312	ZNF genes & repeats	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
6	nsv947606	chr10:37637158-37664124	Enhancers ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:37640800-37641400	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell

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