Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:25024396..25026690-chr10:25027032..25029795,2	MCF-7	breast:
2	chr10:25011164..25015788-chr10:25024890..25029742,6	MCF-7	breast:

Variant related genes	Relation type
ENSG00000107863	Chromatin interaction

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10764492	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1414456	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1414457	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1414458	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4072915	0.85[AMR][1000 genomes]
rs4747494	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4748970	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6482420	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6482421	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6482422	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6482424	0.82[EUR][1000 genomes]
rs6482425	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6482426	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs6482427	0.92[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6482430	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7067766	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7071605	0.81[AMR][1000 genomes]
rs7071609	0.81[AMR][1000 genomes]
rs7083008	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7900706	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7907931	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7912395	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7919485	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs7922575	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25021800-25029800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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