Variant report

Variant	rs10764492
Chromosome Location	chr10:25026812-25026813
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:25011164..25015788-chr10:25024890..25029742,6	MCF-7	breast:

Variant related genes	Relation type
ENSG00000107863	Chromatin interaction

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10466055	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11014220	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11014222	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1414456	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1414457	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1414458	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1414459	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2152432	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4072915	0.85[EUR][1000 genomes]
rs4570483	0.82[EUR][1000 genomes]
rs4747494	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4748970	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4748977	0.84[EUR][1000 genomes]
rs4748978	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6482420	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6482421	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6482422	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6482424	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6482429	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6482430	0.84[AMR][1000 genomes]
rs6482440	0.83[EUR][1000 genomes]
rs7067766	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7071605	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7071609	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7083008	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7900706	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7907931	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7912395	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7916054	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7919485	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7922575	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25021800-25029800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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