Variant report

Variant	rs4748970
Chromosome Location	chr10:25029631-25029632
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:25024396..25026690-chr10:25027032..25029795,2	MCF-7	breast:
2	chr10:25011164..25015788-chr10:25024890..25029742,6	MCF-7	breast:

Variant related genes	Relation type
ENSG00000107863	Chromatin interaction

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10466055	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10764492	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11014220	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11014222	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1414456	1.00[CEU][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1414457	1.00[CEU][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1414458	1.00[CEU][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1414459	0.91[CEU][hapmap];0.91[YRI][hapmap];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2152432	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4072915	0.86[EUR][1000 genomes]
rs4570483	0.83[EUR][1000 genomes]
rs4747494	1.00[CEU][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4748977	0.86[EUR][1000 genomes]
rs4748978	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6482420	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6482421	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6482422	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6482424	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6482428	0.84[CEU][hapmap]
rs6482429	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6482430	0.87[AMR][1000 genomes]
rs6482440	0.84[EUR][1000 genomes]
rs7067766	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7071605	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7071609	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7083008	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7900706	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7907931	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7912395	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7916054	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7919485	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7922575	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25021800-25029800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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