Variant report

Variant	rs6488076
Chromosome Location	chr12:32824887-32824888
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr12:32608432..32610504-chr12:32824697..32826593,2	MCF-7	breast:
2	chr12:31834979..31835669-chr12:32824543..32825377,2	MCF-7	breast:
3	chr12:32815616..32817206-chr12:32823751..32825488,2	MCF-7	breast:
4	chr12:32518122..32518817-chr12:32824574..32825507,2	K562	blood:

Extended variants
information (count: 217 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:215)

rs_ID	r²[population]
rs10082728	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10082887	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10083136	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1020670	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10771978	1.00[CHD][hapmap]
rs10771979	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10771980	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10771981	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10771982	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10771983	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10771984	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10771988	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10771989	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10844279	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10844284	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844285	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844286	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844287	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844288	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844289	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844290	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10844291	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844292	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844293	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10844294	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844295	0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844296	0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844297	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844298	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844299	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844300	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10844301	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844302	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844303	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844304	0.91[CEU][hapmap];1.00[CHB][hapmap];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844305	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844306	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844307	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844308	0.91[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.87[TSI][hapmap];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844309	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844310	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844311	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844312	0.83[EUR][1000 genomes]
rs10844313	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10844314	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844315	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844316	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844317	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844318	0.91[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.83[TSI][hapmap];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844319	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844320	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10844321	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10844322	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10844323	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10844324	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[TSI][hapmap];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10844326	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10844328	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10844329	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10844330	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10844331	0.82[EUR][1000 genomes]
rs10844332	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10844333	0.80[ASN][1000 genomes]
rs10844334	0.80[ASN][1000 genomes]
rs10844335	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10844336	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10844337	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.88[TSI][hapmap];0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10844338	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10844339	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10844340	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];0.88[TSI][hapmap];0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11052144	0.81[ASN][1000 genomes]
rs11052154	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11052155	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11052158	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11052159	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11052160	0.92[ASN][1000 genomes]
rs11052161	0.92[ASN][1000 genomes]
rs11052162	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11052163	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11052164	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11052166	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11052167	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052168	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052169	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052170	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052171	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052172	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052173	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052175	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052176	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052177	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.88[TSI][hapmap];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11052178	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052179	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs11052180	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052181	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052182	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052183	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052184	0.91[CEU][hapmap];1.00[CHB][hapmap];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052185	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052188	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052189	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052191	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052192	0.90[ASN][1000 genomes]
rs11052195	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052196	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052197	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052198	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052199	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.96[TSI][hapmap];0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11052203	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11052205	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11052206	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11052210	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11052211	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11052213	0.80[ASN][1000 genomes]
rs11052214	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11052217	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11502796	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11502797	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11539444	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11539445	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11829276	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11829389	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11829963	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11830934	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.88[TSI][hapmap];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11833496	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11833645	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11834855	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11837120	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12296459	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12298252	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12307480	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12307536	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12316165	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12317270	0.81[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];0.96[TSI][hapmap];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12319906	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12320877	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12322568	0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12369487	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12371996	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13377898	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13377901	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13378050	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1454932	0.83[CHD][hapmap]
rs17541794	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.88[TSI][hapmap];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1965538	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1971910	0.82[EUR][1000 genomes]
rs1971911	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.88[TSI][hapmap];0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2030747	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2124150	0.91[CEU][hapmap];1.00[CHB][hapmap];0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2124151	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2272238	0.91[CEU][hapmap];1.00[CHB][hapmap];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2389082	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28464612	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3200103	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs34034589	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3809232	0.83[CHD][hapmap]
rs3827883	0.85[AMR][1000 genomes];0.80[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4539413	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4641562	0.91[CEU][hapmap];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs56782904	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs58298737	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs58669264	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs60657886	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61328017	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs61369285	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61454222	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6488080	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs66512341	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs67052927	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs67390499	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs67580805	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs68154285	0.84[EUR][1000 genomes]
rs7135097	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs7135691	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7297599	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7298030	0.83[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7300090	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7302970	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.88[TSI][hapmap];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7304930	0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7305277	0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7305407	0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7306406	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap]
rs73082827	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73082829	0.90[ASN][1000 genomes]
rs73088891	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs73099765	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7310136	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73295979	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs74073091	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7952928	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7954206	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7954322	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7954612	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7955411	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7955582	0.91[CEU][hapmap];1.00[CHB][hapmap];0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7957603	0.80[ASN][1000 genomes]
rs7957841	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];0.88[TSI][hapmap];0.80[ASN][1000 genomes]
rs7958074	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7969209	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7969353	0.91[CEU][hapmap];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7970914	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7971327	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7971495	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7971644	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7971719	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7971794	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7980752	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7980822	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9738373	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9738377	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs977542	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9971640	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9971662	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9971708	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9971873	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9971875	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1047658	chr12:32792554-32835646	Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv541457	chr12:32792554-32835646	Active TSS Enhancers Strong transcription Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs6488076	YARS2	cis	cerebellum	SCAN
rs6488076	DNM1L	cis	cerebellum	SCAN

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:32813400-32825400	Weak transcription	Duodenum Smooth Muscle	Duodenum
2	chr12:32824600-32825600	Enhancers	Fetal Thymus	thymus
3	chr12:32824800-32825200	Enhancers	Brain Germinal Matrix	brain
4	chr12:32824800-32831800	Weak transcription	Fetal Muscle Trunk	muscle

The 2.0 version of rSNPBase

Variant report

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