Variant report

Variant	rs6498961
Chromosome Location	chr16:64803859-64803860
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs12446839	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12597618	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12919603	0.81[ASN][1000 genomes]
rs1423997	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs231076	0.85[ASN][1000 genomes]
rs231078	0.85[ASN][1000 genomes]
rs231089	0.83[ASN][1000 genomes]
rs231091	0.83[ASN][1000 genomes]
rs231097	0.88[ASN][1000 genomes]
rs231104	0.88[ASN][1000 genomes]
rs231106	0.87[ASN][1000 genomes]
rs231111	0.88[ASN][1000 genomes]
rs231119	0.87[ASN][1000 genomes]
rs2320127	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs55840743	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7185558	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7190938	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7192050	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7200356	0.85[AMR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:64803200-64804400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr16:64803600-64807400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr16:64803800-64805800	Weak transcription	Osteobl	bone

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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