The 2.0 version of rSNPBase

Variant report

Variant rs6508765
Chromosome Location chr19:38638176-38638177
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38591800-38642800 Weak transcription Small Intestine intestine
2 chr19:38600600-38652800 Weak transcription NHDF-Ad bronchial
3 chr19:38610800-38643600 Weak transcription HepG2 liver
4 chr19:38611000-38652800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr19:38611600-38641400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr19:38611600-38653000 Weak transcription HUVEC blood vessel
7 chr19:38611800-38642600 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr19:38611800-38653000 Weak transcription Fetal Kidney kidney
9 chr19:38613800-38639000 Weak transcription Left Ventricle heart
10 chr19:38613800-38641800 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr19:38613800-38643200 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr19:38613800-38652200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr19:38613800-38652600 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr19:38616000-38652600 Strong transcription Primary B cells from peripheral blood blood
15 chr19:38616200-38641600 Weak transcription H9 Cell Line embryonic stem cell
16 chr19:38616600-38642000 Weak transcription Dnd41 blood
17 chr19:38617000-38652000 Strong transcription Fetal Intestine Small intestine
18 chr19:38618200-38651000 Strong transcription Fetal Intestine Large intestine
19 chr19:38619600-38647800 Strong transcription Fetal Stomach stomach
20 chr19:38621600-38642800 Weak transcription NHLF lung
21 chr19:38622600-38641800 Weak transcription Aorta Aorta
22 chr19:38623000-38642800 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr19:38624400-38652400 Weak transcription Fetal Thymus thymus
24 chr19:38626000-38643400 Weak transcription Placenta Placenta
25 chr19:38626400-38642000 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr19:38626400-38643400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr19:38626400-38652200 Strong transcription A549 lung
28 chr19:38626600-38641000 Weak transcription Hela-S3 cervix
29 chr19:38626600-38643600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr19:38626800-38646000 Weak transcription HMEC breast
31 chr19:38627000-38652400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr19:38627600-38642800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr19:38628400-38652600 Weak transcription Right Atrium heart
34 chr19:38628600-38645000 Strong transcription Sigmoid Colon Sigmoid Colon
35 chr19:38628800-38645200 Strong transcription Duodenum Mucosa Duodenum
36 chr19:38628800-38646400 Strong transcription Rectal Mucosa Donor 29 rectum
37 chr19:38628800-38651200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr19:38629200-38652600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
39 chr19:38629600-38651600 Strong transcription GM12878-XiMat blood
40 chr19:38633000-38651000 Strong transcription Primary B cells from cord blood blood
41 chr19:38633000-38652400 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr19:38633200-38652800 Weak transcription Colon Smooth Muscle Colon
43 chr19:38633400-38638600 Strong transcription HSMM muscle
44 chr19:38633400-38650800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr19:38633400-38653000 Weak transcription Fetal Brain Male brain
46 chr19:38633600-38640000 Weak transcription K562 blood
47 chr19:38634000-38639400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr19:38634200-38642000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr19:38634200-38642200 Weak transcription Ovary ovary
50 chr19:38634200-38643200 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015