Variant report

Variant rs6539689
Chromosome Location chr12:83176517-83176518
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:83153200-83198600 Weak transcription Fetal Intestine Small intestine
2 chr12:83155200-83177200 Weak transcription Fetal Kidney kidney
3 chr12:83157200-83196000 Weak transcription Fetal Muscle Leg muscle
4 chr12:83169000-83177400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr12:83169200-83182600 Weak transcription Fetal Stomach stomach
6 chr12:83169400-83189400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr12:83170000-83178000 Weak transcription Primary monocytes fromperipheralblood blood
8 chr12:83172800-83181200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
9 chr12:83173800-83177200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
10 chr12:83173800-83177600 Enhancers Fetal Lung lung
11 chr12:83174200-83177600 Enhancers iPS-18 Cell Line embryonic stem cell
12 chr12:83174200-83179600 Enhancers iPS-15b Cell Line embryonic stem cell
13 chr12:83174400-83177200 Enhancers Cortex derived primary cultured neurospheres brain
14 chr12:83174400-83181000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr12:83174600-83178000 Weak transcription Monocytes-CD14+_RO01746 blood
16 chr12:83174800-83177400 Enhancers HUES6 Cell Line embryonic stem cell
17 chr12:83175000-83178800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
18 chr12:83175000-83180400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr12:83175600-83176800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr12:83175600-83177800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
21 chr12:83175600-83178200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
22 chr12:83175600-83178600 Enhancers Brain Angular Gyrus brain
23 chr12:83175600-83181000 Enhancers Brain Inferior Temporal Lobe brain
24 chr12:83175800-83177200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr12:83175800-83177600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
26 chr12:83175800-83180200 Enhancers Brain Anterior Caudate brain
27 chr12:83175800-83180800 Enhancers Brain Substantia Nigra brain
28 chr12:83175800-83181000 Enhancers Brain Hippocampus Middle brain
29 chr12:83175800-83181600 Enhancers Brain Cingulate Gyrus brain
30 chr12:83176000-83176600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr12:83176000-83178400 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr12:83176000-83181400 Enhancers HUES48 Cell Line embryonic stem cell
33 chr12:83176200-83176600 Enhancers Colon Smooth Muscle Colon
34 chr12:83176200-83176600 Enhancers Fetal Heart heart
35 chr12:83176200-83177400 Bivalent Enhancer HUES64 Cell Line embryonic stem cell
36 chr12:83176400-83176600 Enhancers Rectal Smooth Muscle rectum
37 chr12:83176400-83177400 Enhancers iPS-20b Cell Line embryonic stem cell
38 chr12:83176400-83178200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links