The 2.0 version of rSNPBase

Variant report

Variant rs6569069
Chromosome Location chr6:119619951-119619952
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:119590600-119621800 Weak transcription Placenta Placenta
2 chr6:119590800-119626600 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr6:119591000-119624200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr6:119592200-119622200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr6:119592400-119620800 Weak transcription Duodenum Mucosa Duodenum
6 chr6:119592400-119633600 Weak transcription Primary T cells from cord blood blood
7 chr6:119592600-119622200 Weak transcription Monocytes-CD14+_RO01746 blood
8 chr6:119592600-119627200 Weak transcription Dnd41 blood
9 chr6:119593000-119622200 Weak transcription Primary T cells fromperipheralblood blood
10 chr6:119593000-119624800 Weak transcription Fetal Thymus thymus
11 chr6:119593000-119626800 Weak transcription Primary monocytes fromperipheralblood blood
12 chr6:119597200-119627400 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr6:119599800-119632600 Weak transcription Spleen Spleen
14 chr6:119600000-119629000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr6:119600400-119624000 Weak transcription Fetal Stomach stomach
16 chr6:119602400-119629200 Weak transcription NH-A brain
17 chr6:119602600-119627400 Weak transcription Gastric stomach
18 chr6:119602600-119629000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr6:119602600-119635600 Weak transcription Esophagus oesophagus
20 chr6:119603400-119626800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr6:119604400-119626600 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr6:119605600-119622400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr6:119605600-119626600 Weak transcription GM12878-XiMat blood
24 chr6:119606200-119626800 Weak transcription Primary B cells from peripheral blood blood
25 chr6:119607200-119626800 Weak transcription Colon Smooth Muscle Colon
26 chr6:119607400-119624000 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr6:119607400-119626800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr6:119607600-119628600 Weak transcription Muscle Satellite Cultured Cells --
29 chr6:119609200-119626800 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr6:119609400-119622600 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr6:119609800-119620800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr6:119611200-119621800 Weak transcription Primary B cells from cord blood blood
33 chr6:119611400-119626600 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr6:119611400-119627400 Weak transcription Rectal Smooth Muscle rectum
35 chr6:119611800-119620800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr6:119611800-119622200 Weak transcription Fetal Kidney kidney
37 chr6:119611800-119627000 Weak transcription Fetal Lung lung
38 chr6:119614200-119629000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr6:119615200-119622200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr6:119615400-119632600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr6:119616400-119630200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr6:119617200-119637400 Weak transcription Aorta Aorta
43 chr6:119617400-119627000 Weak transcription Brain Anterior Caudate brain
44 chr6:119617400-119628200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr6:119617600-119622200 Weak transcription Stomach Smooth Muscle stomach
46 chr6:119617600-119629000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr6:119617600-119632200 Weak transcription Right Ventricle heart
48 chr6:119617800-119622800 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr6:119617800-119626600 Weak transcription NHDF-Ad bronchial
50 chr6:119618000-119621000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015