The 2.0 version of rSNPBase

Variant report

Variant rs7746867
Chromosome Location chr6:119626886-119626887
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:119592400-119633600 Weak transcription Primary T cells from cord blood blood
2 chr6:119592600-119627200 Weak transcription Dnd41 blood
3 chr6:119597200-119627400 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr6:119599800-119632600 Weak transcription Spleen Spleen
5 chr6:119600000-119629000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr6:119602400-119629200 Weak transcription NH-A brain
7 chr6:119602600-119627400 Weak transcription Gastric stomach
8 chr6:119602600-119629000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr6:119602600-119635600 Weak transcription Esophagus oesophagus
10 chr6:119607600-119628600 Weak transcription Muscle Satellite Cultured Cells --
11 chr6:119611400-119627400 Weak transcription Rectal Smooth Muscle rectum
12 chr6:119611800-119627000 Weak transcription Fetal Lung lung
13 chr6:119614200-119629000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr6:119615400-119632600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr6:119616400-119630200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr6:119617200-119637400 Weak transcription Aorta Aorta
17 chr6:119617400-119627000 Weak transcription Brain Anterior Caudate brain
18 chr6:119617400-119628200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr6:119617600-119629000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr6:119617600-119632200 Weak transcription Right Ventricle heart
21 chr6:119618000-119629000 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr6:119618000-119629200 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr6:119618000-119630200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr6:119618200-119633800 Weak transcription Colonic Mucosa Colon
25 chr6:119618600-119629200 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr6:119618600-119630200 Weak transcription Small Intestine intestine
27 chr6:119619400-119632800 Weak transcription Ovary ovary
28 chr6:119620400-119627400 Weak transcription Fetal Muscle Leg muscle
29 chr6:119620800-119627000 Weak transcription Fetal Muscle Trunk muscle
30 chr6:119621000-119627000 Weak transcription Primary T helper cells PMA-I stimulated --
31 chr6:119621000-119627800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr6:119621000-119628200 Strong transcription Liver Liver
33 chr6:119621400-119627400 Strong transcription HepG2 liver
34 chr6:119621600-119628000 Strong transcription Fetal Intestine Large intestine
35 chr6:119621600-119633600 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr6:119621600-119634000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr6:119621800-119629600 Weak transcription Fetal Intestine Small intestine
38 chr6:119623000-119630200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
39 chr6:119623000-119632000 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr6:119623400-119633600 Weak transcription Primary T killer memory cells from peripheral blood blood
41 chr6:119624000-119628200 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr6:119624200-119627400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr6:119624400-119629000 Weak transcription HUVEC blood vessel
44 chr6:119625200-119627400 Weak transcription Pancreas Pancrea
45 chr6:119625200-119629000 Weak transcription NHEK skin
46 chr6:119625200-119629200 Weak transcription NHLF lung
47 chr6:119625200-119631600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr6:119625200-119631600 Genic enhancers K562 blood
49 chr6:119625200-119632800 Weak transcription Right Atrium heart
50 chr6:119625200-119634200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015