Variant report

Variant	rs6569212
Chromosome Location	chr6:121829414-121829415
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1359234	0.89[ASN][1000 genomes]
rs1408277	0.82[ASN][1000 genomes]
rs1408278	0.89[ASN][1000 genomes]
rs1570630	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4143301	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4357173	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4946571	0.82[CHB][hapmap]
rs6901013	0.91[ASN][1000 genomes]
rs6921266	0.87[ASN][1000 genomes]
rs9387965	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9401411	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9490300	0.89[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:121826000-121830000	Weak transcription	HUVEC	blood vessel
2	chr6:121826800-121831400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr6:121827600-121830600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr6:121827800-121830000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr6:121828400-121830800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr6:121828400-121831600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr6:121828400-121831800	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr6:121828600-121829800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr6:121828600-121831000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr6:121828600-121831200	Weak transcription	HMEC	breast
11	chr6:121828600-121831600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
12	chr6:121828600-121831600	Weak transcription	NH-A	brain
13	chr6:121828600-121831800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr6:121828600-121831800	Weak transcription	A549	lung
15	chr6:121828600-121841200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr6:121829200-121836600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr6:121829400-121829600	Enhancers	Colon Smooth Muscle	Colon
18	chr6:121829400-121830400	Weak transcription	Osteobl	bone
19	chr6:121829400-121831800	Weak transcription	Hela-S3	cervix

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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