The 2.0 version of rSNPBase

Variant report

Variant rs6573564
Chromosome Location chr14:65142395-65142396
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:65135400-65149200 Weak transcription Aorta Aorta
2 chr14:65138400-65144000 Enhancers Primary monocytes fromperipheralblood blood
3 chr14:65138600-65142400 Enhancers A549 lung
4 chr14:65138600-65142600 Enhancers Primary Natural Killer cells fromperipheralblood blood
5 chr14:65138600-65143800 Enhancers Primary hematopoietic stem cells short term culture blood
6 chr14:65138800-65142400 Weak transcription Adipose Nuclei Adipose
7 chr14:65138800-65144200 Weak transcription Brain Cingulate Gyrus brain
8 chr14:65138800-65144200 Weak transcription Brain Substantia Nigra brain
9 chr14:65138800-65146600 Weak transcription Brain Angular Gyrus brain
10 chr14:65138800-65146600 Weak transcription Fetal Intestine Large intestine
11 chr14:65139000-65143200 Enhancers Primary T cells fromperipheralblood blood
12 chr14:65139200-65142600 Enhancers HMEC breast
13 chr14:65139400-65142600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr14:65139600-65142600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr14:65139600-65142600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr14:65139800-65142600 Enhancers NHEK skin
17 chr14:65140000-65143400 Enhancers Spleen Spleen
18 chr14:65140200-65142400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr14:65140200-65142600 Enhancers Duodenum Mucosa Duodenum
20 chr14:65140200-65143000 Enhancers Hela-S3 cervix
21 chr14:65140200-65144400 Enhancers Rectal Mucosa Donor 31 rectum
22 chr14:65140400-65142400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr14:65140400-65143400 Enhancers Placenta Placenta
24 chr14:65140800-65148800 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr14:65141000-65142600 Enhancers Primary T helper 17 cells PMA-I stimulated --
26 chr14:65141000-65145400 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr14:65141000-65145600 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr14:65141000-65146200 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr14:65141000-65146600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr14:65141000-65146800 Weak transcription Placenta Amnion Placenta Amnion
31 chr14:65141200-65143000 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr14:65141400-65142400 Weak transcription Colonic Mucosa Colon
33 chr14:65141600-65142400 Enhancers Liver Liver
34 chr14:65142000-65142400 Enhancers Primary B cells from cord blood blood
35 chr14:65142000-65142400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
36 chr14:65142000-65142600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
37 chr14:65142000-65142600 Enhancers Fetal Intestine Small intestine
38 chr14:65142000-65142600 Enhancers Right Ventricle heart
39 chr14:65142000-65142600 Enhancers Skeletal Muscle Male skeletal muscle
40 chr14:65142200-65142400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
41 chr14:65142200-65142400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
42 chr14:65142200-65142400 Enhancers Rectal Mucosa Donor 29 rectum
43 chr14:65142200-65142600 Enhancers Esophagus oesophagus
44 chr14:65142200-65142600 Enhancers Sigmoid Colon Sigmoid Colon
45 chr14:65142200-65142600 Enhancers Stomach Mucosa stomach
46 chr14:65142200-65143400 Enhancers Primary B cells from peripheral blood blood
47 chr14:65142200-65143800 Enhancers Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015