Variant report

No.	Distal block	Cell Line	Cell type
1	chr5:147602522..147604396-chr5:147607993..147610533,2	K562	blood:
2	chr5:147594301..147596355-chr5:147609082..147610629,2	K562	blood:
3	chr5:147597093..147598901-chr5:147607001..147609705,2	K562	blood:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10037138	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs10038416	0.81[CHB][hapmap]
rs10042118	0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs10045567	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs10055415	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs10074211	1.00[CHB][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs10075545	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs10075715	0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs1549884	0.94[ASN][1000 genomes]
rs2288779	0.86[CHB][hapmap];1.00[CHD][hapmap]
rs2400501	0.94[ASN][1000 genomes]
rs2895730	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs57613458	1.00[ASN][1000 genomes]
rs61618834	0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs6580540	0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs6580541	0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs6862717	1.00[CEU][hapmap]
rs6879289	0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs6895242	1.00[CEU][hapmap]
rs7708548	0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs969366	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv883015	chr5:147404281-147751035	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:147608400-147610000	Strong transcription	Hela-S3	cervix
2	chr5:147608600-147610400	Active TSS	ES-I3 Cell Line	embryonic stem cell
3	chr5:147609200-147609400	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr5:147609200-147610400	Active TSS	K562	blood
5	chr5:147609200-147610600	Active TSS	HUES6 Cell Line	embryonic stem cell

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