The 2.0 version of rSNPBase

Variant report

Variant rs6604042
Chromosome Location chr1:93558633-93558634
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93545800-93563200 Weak transcription Esophagus oesophagus
2 chr1:93545800-93568000 Weak transcription Gastric stomach
3 chr1:93545800-93578400 Weak transcription Pancreas Pancrea
4 chr1:93546000-93560600 Weak transcription Placenta Amnion Placenta Amnion
5 chr1:93546000-93573000 Weak transcription Placenta Placenta
6 chr1:93546200-93563200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:93546200-93602200 Weak transcription Aorta Aorta
8 chr1:93546400-93563200 Weak transcription Psoas Muscle Psoas
9 chr1:93546400-93567200 Weak transcription Right Atrium heart
10 chr1:93546400-93569400 Weak transcription Ovary ovary
11 chr1:93546600-93559000 Weak transcription H9 Cell Line embryonic stem cell
12 chr1:93547200-93559000 Weak transcription Brain Hippocampus Middle brain
13 chr1:93547200-93576800 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr1:93547400-93581800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr1:93547600-93559400 Weak transcription Brain Angular Gyrus brain
16 chr1:93547600-93559400 Weak transcription Rectal Smooth Muscle rectum
17 chr1:93547600-93560200 Weak transcription Brain Cingulate Gyrus brain
18 chr1:93547600-93580600 Weak transcription Adipose Nuclei Adipose
19 chr1:93547600-93580600 Weak transcription Brain Inferior Temporal Lobe brain
20 chr1:93547600-93600000 Weak transcription HSMMtube muscle
21 chr1:93547800-93575400 Weak transcription Hela-S3 cervix
22 chr1:93547800-93580600 Weak transcription Fetal Kidney kidney
23 chr1:93548000-93559000 Weak transcription NHDF-Ad bronchial
24 chr1:93548000-93601800 Weak transcription NHLF lung
25 chr1:93548200-93576600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:93548200-93576600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr1:93548200-93576800 Weak transcription Osteobl bone
28 chr1:93548200-93578400 Weak transcription Lung lung
29 chr1:93548600-93569400 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr1:93548800-93559000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr1:93548800-93559600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr1:93548800-93581600 Weak transcription Small Intestine intestine
33 chr1:93549000-93576800 Weak transcription Primary neutrophils fromperipheralblood blood
34 chr1:93549000-93582400 Weak transcription HMEC breast
35 chr1:93549000-93582800 Weak transcription NHEK skin
36 chr1:93550000-93559400 Weak transcription Brain Substantia Nigra brain
37 chr1:93550600-93572600 Weak transcription Fetal Muscle Leg muscle
38 chr1:93551400-93563400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr1:93551400-93579800 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr1:93551600-93559000 Weak transcription Thymus Thymus
41 chr1:93551600-93559200 Weak transcription Liver Liver
42 chr1:93551600-93559800 Weak transcription Brain Anterior Caudate brain
43 chr1:93551600-93570800 Weak transcription HUVEC blood vessel
44 chr1:93551600-93571000 Weak transcription Fetal Intestine Large intestine
45 chr1:93551600-93573000 Weak transcription Fetal Muscle Trunk muscle
46 chr1:93551600-93578400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr1:93551800-93558800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr1:93551800-93559400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr1:93551800-93560200 Weak transcription Left Ventricle heart
50 chr1:93551800-93561400 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015