The 2.0 version of rSNPBase

Variant report

Variant rs4347219
Chromosome Location chr1:93756013-93756014
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93647000-93756400 Weak transcription Gastric stomach
2 chr1:93647200-93757600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr1:93692200-93787800 Weak transcription Placenta Amnion Placenta Amnion
4 chr1:93720000-93762000 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr1:93728600-93764400 Weak transcription Psoas Muscle Psoas
6 chr1:93728600-93769400 Weak transcription Rectal Smooth Muscle rectum
7 chr1:93728600-93770400 Weak transcription HSMM muscle
8 chr1:93728800-93778200 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr1:93729000-93790200 Weak transcription Osteobl bone
10 chr1:93729800-93763200 Weak transcription Pancreas Pancrea
11 chr1:93731000-93765400 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr1:93731200-93787400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:93736400-93771200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr1:93739600-93766600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr1:93743600-93770200 Weak transcription Fetal Kidney kidney
16 chr1:93745800-93780200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr1:93746600-93789400 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr1:93746800-93780000 Weak transcription Aorta Aorta
19 chr1:93750800-93756800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr1:93751200-93761800 Weak transcription Spleen Spleen
21 chr1:93751400-93757200 Strong transcription Primary T cells from cord blood blood
22 chr1:93751600-93794600 Weak transcription Brain Substantia Nigra brain
23 chr1:93752000-93756600 Weak transcription Esophagus oesophagus
24 chr1:93752600-93756200 Strong transcription Fetal Adrenal Gland Adrenal Gland
25 chr1:93752600-93756200 Strong transcription Fetal Stomach stomach
26 chr1:93752600-93757400 Weak transcription Brain Angular Gyrus brain
27 chr1:93753000-93778200 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr1:93753000-93803600 Weak transcription Adipose Nuclei Adipose
29 chr1:93753200-93806400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr1:93753600-93770200 Weak transcription Brain Cingulate Gyrus brain
31 chr1:93753800-93756400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr1:93753800-93756800 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr1:93754200-93756600 Strong transcription Primary T helper cells fromperipheralblood blood
34 chr1:93754600-93756200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr1:93754600-93756200 Strong transcription Fetal Muscle Leg muscle
36 chr1:93754800-93756200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr1:93754800-93756400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr1:93754800-93765200 Weak transcription Fetal Intestine Small intestine
39 chr1:93755000-93762200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr1:93755200-93756800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr1:93755200-93757600 Weak transcription Duodenum Mucosa Duodenum
42 chr1:93755200-93760400 Weak transcription Placenta Placenta
43 chr1:93755400-93756200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr1:93755400-93756400 Strong transcription Brain Hippocampus Middle brain
45 chr1:93755400-93770200 Weak transcription Brain Inferior Temporal Lobe brain
46 chr1:93755400-93778600 Weak transcription Stomach Smooth Muscle stomach
47 chr1:93755400-93778800 Weak transcription Ovary ovary
48 chr1:93755400-93802600 Weak transcription Primary B cells from cord blood blood
49 chr1:93755400-93803200 Weak transcription Fetal Thymus thymus
50 chr1:93755600-93756600 Strong transcription Primary hematopoietic stem cells blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015