The 2.0 version of rSNPBase

Variant report

Variant rs6689007
Chromosome Location chr1:93570977-93570978
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93545800-93578400 Weak transcription Pancreas Pancrea
2 chr1:93546000-93573000 Weak transcription Placenta Placenta
3 chr1:93546200-93602200 Weak transcription Aorta Aorta
4 chr1:93547200-93576800 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr1:93547400-93581800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr1:93547600-93580600 Weak transcription Adipose Nuclei Adipose
7 chr1:93547600-93580600 Weak transcription Brain Inferior Temporal Lobe brain
8 chr1:93547600-93600000 Weak transcription HSMMtube muscle
9 chr1:93547800-93575400 Weak transcription Hela-S3 cervix
10 chr1:93547800-93580600 Weak transcription Fetal Kidney kidney
11 chr1:93548000-93601800 Weak transcription NHLF lung
12 chr1:93548200-93576600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr1:93548200-93576600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr1:93548200-93576800 Weak transcription Osteobl bone
15 chr1:93548200-93578400 Weak transcription Lung lung
16 chr1:93548800-93581600 Weak transcription Small Intestine intestine
17 chr1:93549000-93576800 Weak transcription Primary neutrophils fromperipheralblood blood
18 chr1:93549000-93582400 Weak transcription HMEC breast
19 chr1:93549000-93582800 Weak transcription NHEK skin
20 chr1:93550600-93572600 Weak transcription Fetal Muscle Leg muscle
21 chr1:93551400-93579800 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr1:93551600-93571000 Weak transcription Fetal Intestine Large intestine
23 chr1:93551600-93573000 Weak transcription Fetal Muscle Trunk muscle
24 chr1:93551600-93578400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr1:93551800-93571200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr1:93551800-93572400 Weak transcription Brain Germinal Matrix brain
27 chr1:93551800-93572600 Weak transcription Duodenum Mucosa Duodenum
28 chr1:93551800-93576600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:93551800-93579800 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr1:93552000-93572600 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr1:93552000-93580000 Weak transcription NH-A brain
32 chr1:93552200-93573600 Weak transcription Fetal Lung lung
33 chr1:93552600-93573000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
34 chr1:93555400-93581000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr1:93555600-93572600 Weak transcription HSMM muscle
36 chr1:93559400-93571200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr1:93559400-93571400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr1:93559400-93576600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr1:93559400-93581000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr1:93560000-93573800 Weak transcription Liver Liver
41 chr1:93560200-93575600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr1:93560200-93581600 Weak transcription Brain Anterior Caudate brain
43 chr1:93560400-93571200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr1:93560400-93573000 Weak transcription A549 lung
45 chr1:93560400-93574400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr1:93561400-93572800 Weak transcription Fetal Stomach stomach
47 chr1:93561800-93575400 Weak transcription HepG2 liver
48 chr1:93562000-93571600 Weak transcription Fetal Brain Female brain
49 chr1:93562600-93572400 Weak transcription Primary B cells from peripheral blood blood
50 chr1:93563400-93582000 Weak transcription Esophagus oesophagus

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015