Variant report

Variant	rs665306
Chromosome Location	chr11:65624025-65624026
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr11:65623326-65628516	K562	blood:	n/a	n/a
2	POLR2A	chr11:65617944-65626197	K562	blood:	n/a	n/a
3	HCFC1	chr11:65623229-65629451	Hela-S3	cervix:	n/a	n/a
4	POLR2A	chr11:65617092-65633870	K562	blood:	n/a	n/a
5	POLR2A	chr11:65623808-65626436	PFSK-1	brain:	n/a	n/a
6	NFATC1	chr11:65623447-65625282	GM12878	blood:	n/a	n/a
7	POLR2A	chr11:65622786-65624053	HepG2	liver:	n/a	n/a
8	SIN3AK20	chr11:65624015-65624817	PANC-1	pancreas:	n/a	n/a
9	SIN3AK20	chr11:65623944-65626089	MCF-7	breast:	n/a	n/a
10	POLR2A	chr11:65623812-65628919	HUVEC	blood vessel:	n/a	n/a
11	NFATC1	chr11:65623512-65624048	GM12878	blood:	n/a	n/a
12	ELK4	chr11:65623491-65625123	Hela-S3	cervix:	n/a	n/a
13	POLR2A	chr11:65624020-65626027	GM12878	blood:	n/a	n/a
14	POLR2A	chr11:65623759-65624058	Hela-S3	cervix:	n/a	n/a
15	POLR2A	chr11:65616755-65639999	U87	brain:	n/a	n/a
16	POLR2A	chr11:65624019-65626416	H1-hESC	embryonic stem cell:	n/a	n/a
17	POLR2A	chr11:65623953-65628863	K562	blood:	n/a	n/a
18	POLR2A	chr11:65617198-65628973	PANC-1	pancreas:	n/a	n/a
19	MXI1	chr11:65623287-65629335	SK-N-SH	brain:	n/a	chr11:65626884-65626899 chr11:65624499-65624508
20	POLR2A	chr11:65623783-65625294	GM12891	blood:	n/a	n/a
21	POLR2A	chr11:65623965-65627365	Hela-S3	cervix:	n/a	n/a
22	POLR2A	chr11:65623190-65629062	HUVEC	blood vessel:	n/a	n/a
23	POLR2A	chr11:65623392-65626316	PFSK-1	brain:	n/a	n/a
24	STAT5A	chr11:65623693-65628911	GM12878	blood:	n/a	chr11:65625472-65625484 chr11:65627530-65627537 chr11:65624306-65624315 chr11:65624300-65624320 chr11:65628125-65628137 chr11:65624306-65624314 chr11:65625474-65625486 chr11:65624305-65624314 chr11:65627123-65627135 chr11:65625340-65625352
25	POLR2A	chr11:65623963-65628863	PANC-1	pancreas:	n/a	n/a
26	ETS1	chr11:65623785-65625176	A549	lung:	n/a	chr11:65624720-65624731 chr11:65624294-65624301 chr11:65624550-65624561
27	POLR2A	chr11:65616422-65629961	H1-hESC	embryonic stem cell:	n/a	n/a
28	ATF2	chr11:65623712-65625297	H1-hESC	embryonic stem cell:	n/a	n/a
29	POLR2A	chr11:65617007-65628594	GM12891	blood:	n/a	n/a
30	PML	chr11:65623798-65629060	GM12878	blood:	n/a	n/a
31	POLR2A	chr11:65617073-65630131	GM12892	blood:	n/a	n/a
32	POLR2A	chr11:65623248-65626366	H1-hESC	embryonic stem cell:	n/a	n/a
33	POLR2A	chr11:65616778-65626416	Hela-S3	cervix:	n/a	n/a
34	POU2F2	chr11:65623978-65626180	GM12878	blood:	n/a	chr11:65624345-65624356
35	POLR2A	chr11:65624016-65626047	GM12878	blood:	n/a	n/a
36	POLR2A	chr11:65616706-65640269	U87	brain:	n/a	n/a
37	POLR2A	chr11:65622550-65624159	H1-hESC	embryonic stem cell:	n/a	n/a
38	GABPA	chr11:65623980-65626390	A549	lung:	n/a	chr11:65624853-65624864 chr11:65624523-65624532 chr11:65625323-65625337 chr11:65625408-65625419 chr11:65625512-65625521 chr11:65624853-65624862 chr11:65625408-65625417 chr11:65625405-65625419 chr11:65625408-65625422 chr11:65624722-65624731 chr11:65625320-65625334 chr11:65624850-65624864
39	MXI1	chr11:65623008-65629086	IMR90	lung:	n/a	chr11:65626884-65626899 chr11:65624499-65624508
40	EP300	chr11:65623970-65626131	ECC-1	luminal epithelium:	n/a	chr11:65625187-65625203 chr11:65625628-65625644 chr11:65625187-65625196 chr11:65625057-65625073 chr11:65625056-65625072 chr11:65625035-65625051 chr11:65625861-65625877
41	POLR2A	chr11:65622986-65628609	HUVEC	blood vessel:	n/a	n/a
42	CHD1	chr11:65623793-65629597	IMR90	lung:	n/a	chr11:65627014-65627024 chr11:65627021-65627031 chr11:65625300-65625310 chr11:65625248-65625255 chr11:65624723-65624733
43	SREBP1	chr11:65623604-65628430	GM12878	blood:	n/a	chr11:65627898-65627909
44	POLR2A	chr11:65616458-65628745	GM12891	blood:	n/a	n/a
45	POLR2A	chr11:65622802-65628535	GM12892	blood:	n/a	n/a
46	POLR2A	chr11:65616541-65630139	GM12878	blood:	n/a	n/a
47	ELF1	chr11:65623915-65625074	MCF-7	breast:	n/a	n/a
48	NFIC	chr11:65624021-65625079	GM12878	blood:	n/a	n/a
49	POLR2A	chr11:65616547-65628578	GM12891	blood:	n/a	n/a
50	HEY1	chr11:65618698-65629274	K562	blood:	n/a	chr11:65625188-65625203 chr11:65625757-65625772 chr11:65624828-65624843 chr11:65626730-65626745 chr11:65620030-65620045 chr11:65620041-65620056

No.	Distal block	Cell Line	Cell type
1	chr11:65601147..65603673-chr11:65623876..65625928,3	MCF-7	breast:
2	chr11:65472429..65485450-chr11:65615794..65629774,38	K562	blood:
3	chr11:65461869..65464366-chr11:65623666..65626207,3	MCF-7	breast:
4	chr11:64544371..64546795-chr11:65624012..65625591,2	K562	blood:
5	chr11:65623212..65627104-chr11:65728021..65730947,7	MCF-7	breast:
6	chr11:65429132..65432605-chr11:65622916..65626202,6	MCF-7	breast:
7	chr11:502665..504183-chr11:65623020..65625621,2	K562	blood:
8	chr11:65545624..65552162-chr11:65622017..65629334,15	K562	blood:
9	chr11:65343451..65346634-chr11:65622563..65625144,3	K562	blood:
10	chr11:65401684..65404221-chr11:65623185..65625956,3	K562	blood:
11	chr11:65622510..65630779-chr11:65675126..65689187,23	MCF-7	breast:
12	chr11:65482499..65489390-chr11:65622947..65628870,15	MCF-7	breast:
13	chr11:65423887..65432217-chr11:65622069..65628988,12	K562	blood:
14	chr11:65485004..65489716-chr11:65621545..65626984,9	K562	blood:
15	chr11:65336222..65339291-chr11:65623626..65626992,4	K562	blood:
16	chr11:65623413..65628719-chr11:65768360..65773657,11	MCF-7	breast:
17	chr11:65377447..65384699-chr11:65622853..65629192,15	MCF-7	breast:
18	chr11:65485735..65490975-chr11:65621882..65626984,8	K562	blood:
19	chr11:65545480..65548295-chr11:65624014..65629369,5	MCF-7	breast:
20	chr11:65623999..65626428-chr11:65787537..65789052,2	MCF-7	breast:
21	chr11:65622512..65626950-chr11:65664131..65668520,8	MCF-7	breast:
22	chr11:65381645..65384488-chr11:65623214..65626222,3	K562	blood:
23	chr11:65623430..65625691-chr11:65837839..65839866,2	K562	blood:
24	chr11:65401684..65407000-chr11:65623220..65627704,6	K562	blood:
25	chr11:65544951..65562337-chr11:65623093..65630859,34	MCF-7	breast:
26	chr11:65391012..65395205-chr11:65623558..65626894,4	MCF-7	breast:
27	chr11:65552282..65556398-chr11:65623209..65626538,5	MCF-7	breast:
28	chr11:65553824..65556845-chr11:65623477..65626342,3	K562	blood:
29	chr11:65477884..65488010-chr11:65623516..65630419,28	MCF-7	breast:
30	chr11:65477240..65482056-chr11:65622069..65629377,17	MCF-7	breast:
31	chr11:65562689..65566411-chr11:65620359..65624603,6	K562	blood:
32	chr11:65556556..65561389-chr11:65623769..65628916,7	MCF-7	breast:
33	chr11:65476077..65482461-chr11:65623301..65629774,23	K562	blood:

Variant related genes	Relation type
MUS81	TF binding region
CFL1	TF binding region
ENSG00000175573	Chromatin interaction
ENSG00000172922	Chromatin interaction
ENSG00000168066	Chromatin interaction
ENSG00000255404	Chromatin interaction
ENSG00000172977	Chromatin interaction
ENSG00000175550	Chromatin interaction
ENSG00000172818	Chromatin interaction
ENSG00000175467	Chromatin interaction
ENSG00000173039	Chromatin interaction
ENSG00000173327	Chromatin interaction
ENSG00000254470	Chromatin interaction
ENSG00000269038	Chromatin interaction
ENSG00000175592	Chromatin interaction
ENSG00000023191	Chromatin interaction
ENSG00000255120	Chromatin interaction
ENSG00000239356	Chromatin interaction
ENSG00000175827	Chromatin interaction
ENSG00000197136	Chromatin interaction
ENSG00000175115	Chromatin interaction
ENSG00000175376	Chromatin interaction
ENSG00000175334	Chromatin interaction
ENSG00000175294	Chromatin interaction
ENSG00000172803	Chromatin interaction
ENSG00000173465	Chromatin interaction
ENSG00000213445	Chromatin interaction
ENSG00000173442	Chromatin interaction
ENSG00000260233	Chromatin interaction
ENSG00000266041	Chromatin interaction

Extended variants
information (count: 46 )
Associated
traits (count: 14 )

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10791828	0.85[AMR][1000 genomes]
rs10896053	0.88[GIH][hapmap]
rs11227311	0.84[GIH][hapmap]
rs1204772	0.88[GIH][hapmap]
rs12575663	0.80[GIH][hapmap]
rs13817	0.93[ASW][hapmap];0.88[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.96[MEX][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1939212	0.92[CHB][hapmap];0.89[CHD][hapmap];0.97[GIH][hapmap];0.88[MEX][hapmap];0.87[TSI][hapmap];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4621	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs508548	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs538394	0.96[CEU][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs545500	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs558114	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.99[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs570387	0.80[GIH][hapmap]
rs601887	0.88[GIH][hapmap]
rs621348	0.88[GIH][hapmap]
rs630303	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs630755	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs633800	0.80[GIH][hapmap]
rs633877	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs635375	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.99[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs648732	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.99[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs652021	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];0.99[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs656040	1.00[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.96[MEX][hapmap];0.99[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs659824	0.80[GIH][hapmap];0.88[MKK][hapmap]
rs659857	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.91[MEX][hapmap];0.99[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap]
rs667555	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs668356	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs679147	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7107912	0.84[GIH][hapmap]
rs7114014	0.92[CHB][hapmap];0.86[CHD][hapmap];0.95[GIH][hapmap]
rs7114237	0.88[GIH][hapmap]
rs7125986	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7947741	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7947929	0.92[AMR][1000 genomes];0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv897736	chr11:65335705-65676516	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	227 gene(s)	inside rSNPs	diseases
2	nsv430401	chr11:65419324-65788024	Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	224 gene(s)	inside rSNPs	diseases
3	esv2758274	chr11:65559893-65722363	Genic enhancers Active TSS Flanking Active TSS Strong transcription Weak transcription Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	178 gene(s)	inside rSNPs	diseases
4	esv2759834	chr11:65559893-65722363	Flanking Active TSS Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	178 gene(s)	inside rSNPs	diseases
5	nsv427890	chr11:65559893-65722363	Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	178 gene(s)	inside rSNPs	diseases
6	nsv897761	chr11:65580638-65738566	Weak transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	186 gene(s)	inside rSNPs	diseases
7	nsv555215	chr11:65581579-65676516	Strong transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	165 gene(s)	inside rSNPs	diseases
8	nsv897762	chr11:65613218-65758854	Active TSS Flanking Active TSS Genic enhancers Enhancers Flanking Bivalent TSS/Enh Strong transcription Weak transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	185 gene(s)	inside rSNPs	diseases
9	nsv897763	chr11:65613348-65644027	Weak transcription Genic enhancers Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	121 gene(s)	inside rSNPs	diseases
10	nsv897764	chr11:65613348-65695222	Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	176 gene(s)	inside rSNPs	diseases
11	nsv897765	chr11:65623708-65758854	Strong transcription Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	178 gene(s)	inside rSNPs	diseases
12	nsv897766	chr11:65624025-65644027	Transcr. at gene 5' and 3' Genic enhancers Enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	112 gene(s)	inside rSNPs	diseases

mRNA abundance (count:14)

SNP	Gene	Cis/trans	Tissue	Source
rs665306	SNX32	cis	Whole Blood	GTEx
rs665306	EIF1AD	cis	parietal	SCAN
rs665306	SNX32	cis	Artery Tibial	GTEx
rs665306	SNX32	cis	Esophagus Muscularis	GTEx
rs665306	PACS1	cis	parietal	SCAN
rs665306	SNX32	cis	Thyroid	GTEx
rs665306	SNX32	cis	cerebellum	SCAN
rs665306	PLCB3	cis	parietal	SCAN
rs665306	CARNS1	cis	cerebellum	SCAN
rs665306	SNX32	cis	parietal	SCAN
rs665306	MTA2	cis	parietal	SCAN
rs665306	EFEMP2	cis	multi-tissue	Pritchard
rs665306	DPP3	cis	lymphoblastoid	seeQTL
rs665306	FIBP	cis	cerebellum	SCAN

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:65616800-65625000	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr11:65618000-65624600	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr11:65622000-65624200	Transcr. at gene 5' and 3'	Colonic Mucosa	Colon
4	chr11:65622000-65624400	Transcr. at gene 5' and 3'	Rectal Mucosa Donor 29	rectum
5	chr11:65622000-65624800	Transcr. at gene 5' and 3'	Fetal Intestine Small	intestine
6	chr11:65622400-65624600	Transcr. at gene 5' and 3'	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr11:65622600-65624400	Transcr. at gene 5' and 3'	Fetal Brain Female	brain
8	chr11:65622800-65624200	Transcr. at gene 5' and 3'	Fetal Intestine Large	intestine
9	chr11:65622800-65624600	Transcr. at gene 5' and 3'	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr11:65623000-65624200	Transcr. at gene 5' and 3'	Brain Germinal Matrix	brain
11	chr11:65623000-65624400	Transcr. at gene 5' and 3'	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr11:65623000-65624400	Transcr. at gene 5' and 3'	HSMM	muscle
13	chr11:65623000-65624400	Transcr. at gene 5' and 3'	NH-A	brain
14	chr11:65623000-65624600	Transcr. at gene 5' and 3'	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr11:65623000-65625000	Transcr. at gene 5' and 3'	A549	lung
16	chr11:65623200-65624200	Transcr. at gene 5' and 3'	Hela-S3	cervix
17	chr11:65623200-65624400	Transcr. at gene 5' and 3'	GM12878-XiMat	blood
18	chr11:65623200-65624400	Transcr. at gene 5' and 3'	HUVEC	blood vessel
19	chr11:65623200-65624600	Transcr. at gene 5' and 3'	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr11:65623200-65624800	Transcr. at gene 5' and 3'	Osteobl	bone
21	chr11:65623200-65625000	Transcr. at gene 5' and 3'	NHLF	lung
22	chr11:65623400-65624200	Transcr. at gene 5' and 3'	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr11:65623400-65624200	Transcr. at gene 5' and 3'	Primary hematopoietic stem cells short term culture	blood
24	chr11:65623400-65624200	Transcr. at gene 5' and 3'	Cortex derived primary cultured neurospheres	brain
25	chr11:65623400-65624400	Transcr. at gene 5' and 3'	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr11:65623400-65624400	Transcr. at gene 5' and 3'	Brain Inferior Temporal Lobe	brain
27	chr11:65623400-65624400	Transcr. at gene 5' and 3'	Stomach Smooth Muscle	stomach
28	chr11:65623400-65624400	Transcr. at gene 5' and 3'	Thymus	Thymus
29	chr11:65623400-65624400	Transcr. at gene 5' and 3'	NHDF-Ad	bronchial
30	chr11:65623400-65624800	Transcr. at gene 5' and 3'	HUES6 Cell Line	embryonic stem cell
31	chr11:65623400-65624800	Transcr. at gene 5' and 3'	HMEC	breast
32	chr11:65623400-65625000	Transcr. at gene 5' and 3'	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr11:65623400-65625000	Transcr. at gene 5' and 3'	Muscle Satellite Cultured Cells	--
34	chr11:65623400-65625000	Transcr. at gene 5' and 3'	NHEK	skin
35	chr11:65623400-65625200	Transcr. at gene 5' and 3'	Dnd41	blood
36	chr11:65623600-65624200	Transcr. at gene 5' and 3'	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr11:65623600-65624200	Transcr. at gene 5' and 3'	Primary T helper memory cells from peripheral blood 2	blood
38	chr11:65623600-65624200	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
39	chr11:65623600-65624200	Weak transcription	Ovary	ovary
40	chr11:65623600-65624400	Transcr. at gene 5' and 3'	HUES48 Cell Line	embryonic stem cell
41	chr11:65623600-65624400	Transcr. at gene 5' and 3'	HUES64 Cell Line	embryonic stem cell
42	chr11:65623600-65624400	Transcr. at gene 5' and 3'	iPS-18 Cell Line	embryonic stem cell
43	chr11:65623600-65624400	Transcr. at gene 5' and 3'	iPS-20b Cell Line	embryonic stem cell
44	chr11:65623600-65624400	Transcr. at gene 5' and 3'	Primary T helper cells PMA-I stimulated	--
45	chr11:65623600-65624400	Transcr. at gene 5' and 3'	Fetal Adrenal Gland	Adrenal Gland
46	chr11:65623600-65624400	Transcr. at gene 5' and 3'	Fetal Muscle Trunk	muscle
47	chr11:65623600-65624600	Transcr. at gene 5' and 3'	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
48	chr11:65623600-65626000	Active TSS	HSMMtube	muscle
49	chr11:65623800-65624200	Transcr. at gene 5' and 3'	ES-I3 Cell Line	embryonic stem cell
50	chr11:65623800-65624200	Flanking Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell

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