The 2.0 version of rSNPBase

Variant report

Variant rs66534107
Chromosome Location chr18:29457940-29457941
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:29405600-29481800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr18:29406200-29518600 Weak transcription Fetal Brain Male brain
3 chr18:29408000-29460200 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr18:29408600-29471800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
5 chr18:29409800-29466600 Weak transcription Gastric stomach
6 chr18:29415800-29461800 Weak transcription Fetal Heart heart
7 chr18:29417600-29515600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr18:29418400-29470400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr18:29419000-29460400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr18:29419000-29461800 Weak transcription Brain Cingulate Gyrus brain
11 chr18:29419400-29458600 Weak transcription NHLF lung
12 chr18:29431800-29461800 Strong transcription Primary neutrophils fromperipheralblood blood
13 chr18:29431800-29499000 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr18:29431800-29512600 Strong transcription Primary monocytes fromperipheralblood blood
15 chr18:29432400-29461200 Weak transcription Psoas Muscle Psoas
16 chr18:29432400-29468200 Weak transcription Small Intestine intestine
17 chr18:29432400-29480000 Weak transcription H9 Cell Line embryonic stem cell
18 chr18:29432600-29481600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr18:29432600-29507600 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr18:29432600-29521400 Weak transcription Stomach Mucosa stomach
21 chr18:29434000-29459000 Weak transcription Hela-S3 cervix
22 chr18:29434000-29460800 Weak transcription A549 lung
23 chr18:29435400-29458800 Strong transcription Rectal Mucosa Donor 29 rectum
24 chr18:29438200-29458400 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr18:29441200-29460400 Weak transcription Brain Hippocampus Middle brain
26 chr18:29445000-29458200 Strong transcription Fetal Intestine Large intestine
27 chr18:29445800-29459400 Strong transcription Primary T helper cells fromperipheralblood blood
28 chr18:29446000-29489000 Strong transcription Fetal Thymus thymus
29 chr18:29446200-29458000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr18:29446800-29459800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr18:29447800-29459200 Strong transcription Primary T cells from cord blood blood
32 chr18:29448800-29459200 Strong transcription Duodenum Smooth Muscle Duodenum
33 chr18:29449200-29458800 Strong transcription HUES64 Cell Line embryonic stem cell
34 chr18:29449200-29460600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr18:29449200-29489000 Strong transcription Adipose Nuclei Adipose
36 chr18:29449600-29458200 Strong transcription Duodenum Mucosa Duodenum
37 chr18:29449600-29459800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr18:29450000-29464800 Strong transcription HUES6 Cell Line embryonic stem cell
39 chr18:29450200-29471800 Strong transcription Primary T cells fromperipheralblood blood
40 chr18:29450400-29459400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr18:29450400-29462600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr18:29450600-29459200 Strong transcription iPS-20b Cell Line embryonic stem cell
43 chr18:29450800-29458800 Strong transcription Primary T regulatory cells fromperipheralblood blood
44 chr18:29451600-29458600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr18:29451800-29465400 Strong transcription Dnd41 blood
46 chr18:29452000-29458400 Strong transcription HepG2 liver
47 chr18:29452000-29459400 Strong transcription iPS-18 Cell Line embryonic stem cell
48 chr18:29452000-29472000 Strong transcription Primary B cells from peripheral blood blood
49 chr18:29452200-29458200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
50 chr18:29453000-29458600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015