The 2.0 version of rSNPBase

Variant report

Variant rs6656119
Chromosome Location chr1:63323253-63323254
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:63251000-63327400 Weak transcription Fetal Stomach stomach
2 chr1:63251200-63327400 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr1:63261600-63326400 Weak transcription Placenta Placenta
4 chr1:63267200-63327000 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:63267200-63327400 Weak transcription Colon Smooth Muscle Colon
6 chr1:63270400-63331400 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr1:63271400-63324400 Weak transcription Pancreas Pancrea
8 chr1:63271600-63326800 Weak transcription Aorta Aorta
9 chr1:63271600-63327400 Weak transcription Thymus Thymus
10 chr1:63271800-63324000 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr1:63273800-63329000 Weak transcription Brain Cingulate Gyrus brain
12 chr1:63276600-63324400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr1:63276800-63331400 Weak transcription Fetal Lung lung
14 chr1:63277600-63327600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr1:63278200-63325000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr1:63283800-63324000 Weak transcription K562 blood
17 chr1:63287800-63327400 Weak transcription Lung lung
18 chr1:63293800-63324000 Weak transcription Brain Anterior Caudate brain
19 chr1:63294600-63324000 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr1:63298200-63328600 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr1:63298400-63328000 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr1:63298400-63345800 Weak transcription Left Ventricle heart
23 chr1:63300600-63327200 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr1:63301200-63323800 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr1:63302200-63328400 Weak transcription Fetal Brain Male brain
26 chr1:63302600-63324000 Weak transcription Stomach Smooth Muscle stomach
27 chr1:63302600-63324200 Weak transcription Esophagus oesophagus
28 chr1:63303400-63327800 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr1:63306600-63327400 Weak transcription HUES64 Cell Line embryonic stem cell
30 chr1:63306800-63327600 Weak transcription iPS-18 Cell Line embryonic stem cell
31 chr1:63308400-63329200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr1:63310000-63327800 Weak transcription Brain Angular Gyrus brain
33 chr1:63310000-63340600 Weak transcription Brain Substantia Nigra brain
34 chr1:63310200-63324400 Weak transcription Spleen Spleen
35 chr1:63310400-63330800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr1:63312000-63333000 Weak transcription Primary hematopoietic stem cells blood
37 chr1:63312000-63335200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr1:63312200-63326400 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr1:63312200-63335000 Weak transcription Duodenum Mucosa Duodenum
40 chr1:63316400-63324400 Weak transcription Gastric stomach
41 chr1:63318000-63328200 Weak transcription Dnd41 blood
42 chr1:63318000-63329200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr1:63318200-63323800 Weak transcription Brain Inferior Temporal Lobe brain
44 chr1:63318200-63329400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr1:63319400-63324600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr1:63319400-63326800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr1:63319400-63327400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr1:63320800-63325400 Strong transcription Primary B cells from peripheral blood blood
49 chr1:63320800-63329200 Weak transcription Brain Hippocampus Middle brain
50 chr1:63321000-63323400 Strong transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015